Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397917.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1222.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3715

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
177--501
170
1.9
171
85
4
451
38
11
15
35
1.82
537--846
170
1.8
170
83
6
414
34
13
15
36
1.86
994--1329
171
2.0
171
81
5
394
39
10
13
36
1.78
1854--2267
179
2.4
179
78
6
402
40
14
11
34
1.81
1785--2863
171
6.3
170
72
6
708
36
13
13
33
1.84
3201--3709
171
3.0
168
79
9
507
38
11
13
36
1.81

Tables:   1

The End!