Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397929.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1234.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11891

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1966--2806
171
4.9
170
74
5
700
37
11
13
35
1.81
1989--2662
342
2.0
331
84
4
875
37
10
13
35
1.80
5004--5332
171
2.0
161
76
13
301
36
10
13
36
1.79
8819--9267
170
2.6
171
74
6
408
35
10
14
34
1.80
9376--9955
171
3.4
170
78
6
591
37
15
11
35
1.83
9376--10538
319
3.5
328
77
8
910
35
14
11
37
1.83
9962--10538
171
3.4
168
77
7
563
34
13
11
38
1.81
10293--10654
171
2.1
171
81
3
415
34
15
10
36
1.82

Tables:   1

The End!