Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018397946.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1250.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 625

Length: 1043
ACGTcount: A:0.23, C:0.08, G:0.07, T:0.27

Warning! 369 characters in sequence are not A, C, G, or T


Found at i:842 original size:11 final size:11

Alignment explanation


    Indices: 826--855  Score: 60
    Period size: 11  Copynumber: 2.7  Consensus size: 11

        816 AATCTCATAA

                       
        826 TTGATTTTAAG
          1 TTGATTTTAAG

                       
        837 TTGATTTTAAG
          1 TTGATTTTAAG

                    
        848 TTGATTTT
          1 TTGATTTT

        856 TTAACATTTA


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  11   19  1.00

ACGTcount: A:0.23, C:0.00, G:0.17, T:0.60


Consensus pattern (11 bp):   
TTGATTTTAAG
Done.