Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397961.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1268.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11677

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
236--592
171
2.1
173
82
6
422
35
13
12
39
1.82
1920--2465
172
3.2
171
72
4
386
36
13
14
33
1.85
2190--2521
171
1.9
171
79
3
373
38
13
14
33
1.86
4879--5855
171
5.7
170
75
6
771
35
13
13
35
1.84
6255--8776
171
14.7
169
78
5
2116
35
13
12
37
1.83
7710--7750
21
2.0
20
86
9
57
48
12
9
29
1.72
10081--10647
172
3.3
169
77
3
490
38
9
13
35
1.78
11182--11677
171
2.9
168
75
7
464
38
11
13
34
1.82

Tables:   1

The End!