Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018397983.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1288.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 12546
ACGTcount: A:0.15, C:0.05, G:0.05, T:0.15

Warning! 7536 characters in sequence are not A, C, G, or T


Found at i:10360 original size:12 final size:12

Alignment explanation


    Indices: 10343--10367  Score: 50
    Period size: 12  Copynumber: 2.1  Consensus size: 12

      10333 CTGCTAAGAA

                        
      10343 AAGTCTATTTAT
          1 AAGTCTATTTAT

                        
      10355 AAGTCTATTTAT
          1 AAGTCTATTTAT

             
      10367 A
          1 A

      10368 GTCACCCATG


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  12   13  1.00

ACGTcount: A:0.36, C:0.08, G:0.08, T:0.48


Consensus pattern (12 bp):   
AAGTCTATTTAT
Done.