Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397985.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_129.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31045

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
998--1418
171
2.5
171
80
4
456
38
10
14
33
1.81
2746--3315
171
3.3
167
77
7
498
38
11
14
34
1.82
5108--5436
170
2.0
160
78
11
326
39
9
12
34
1.76
9408--12564
170
18.5
168
77
5
2063
39
11
13
34
1.80
9409--12564
515
6.2
507
76
7
2316
39
11
13
34
1.80
13130--13496
170
2.2
170
81
4
429
39
11
13
31
1.82
14842--16187
170
7.9
170
78
5
1110
40
11
13
34
1.81
14837--16192
341
4.0
338
79
6
1276
40
11
13
34
1.81
19046--19380
173
1.9
172
79
5
372
39
13
13
33
1.84
24593--25116
169
3.1
169
76
7
454
34
12
9
39
1.76
26131--26479
169
2.1
169
79
5
375
41
10
13
32
1.78
30185--30228
22
2.0
23
86
8
65
47
4
15
31
1.66

Tables:   1

The End!