Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398000.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1306.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13493

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3695--4973
171
7.5
170
76
5
954
34
14
11
36
1.83
4268--4973
341
2.1
341
84
3
904
35
14
11
37
1.83
5074--5440
172
2.1
170
80
5
407
39
12
13
33
1.83
5504--5567
30
2.1
31
85
8
87
42
4
21
31
1.74
5534--6543
171
5.9
171
78
6
1006
38
12
13
36
1.82
6787--7125
171
2.0
172
82
6
411
39
12
14
33
1.83
7851--8162
171
1.8
171
82
5
398
38
12
14
34
1.84
8271--8879
171
3.6
171
77
6
572
35
11
14
34
1.83
9440--9766
171
2.0
161
79
5
275
36
12
15
33
1.84
12346--12994
171
3.8
169
80
3
633
41
12
13
32
1.82
12741--13284
277
2.0
275
82
5
668
38
12
15
34
1.85
13017--13483
171
2.7
171
78
7
439
37
13
14
34
1.85

Tables:   1

The End!