Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398038.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1346.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5101

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--1335
347
3.9
337
76
8
1042
38
12
13
35
1.82
1--1323
172
7.6
171
75
5
863
38
12
13
35
1.83
1--1220
519
2.4
517
75
9
1140
39
12
13
34
1.83
2422--2952
172
3.1
170
77
5
485
36
11
13
35
1.82
4044--5101
172
6.2
170
76
6
854
38
12
13
34
1.83
4230--5055
174
4.8
169
77
5
486
38
12
13
35
1.83
4009--5101
340
3.2
337
76
8
1028
38
12
13
34
1.83

Tables:   1

The End!