Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397332.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2675.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54470

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16370--16411
20
2.0
21
86
13
61
19
23
0
57
1.41
21810--21863
15
3.6
15
89
0
63
33
5
25
35
1.80
21825--21864
15
2.7
15
96
0
71
32
7
27
32
1.85
22017--22161
26
5.4
28
66
19
87
32
1
2
64
1.14
22089--22156
20
3.4
20
78
13
68
29
0
1
69
0.98
22018--22234
109
2.0
111
88
5
327
31
3
1
63
1.21
22172--22238
34
2.1
32
81
13
84
28
5
1
64
1.26
22350--22376
14
1.9
14
100
0
54
22
0
0
77
0.76
26437--26482
22
2.1
22
84
8
58
43
15
19
21
1.87
27768--27923
72
2.2
70
79
12
158
30
19
15
34
1.93
28277--28449
55
3.1
55
69
12
129
31
20
21
26
1.98
28591--28791
61
3.4
58
79
10
201
31
24
16
27
1.97
29485--29514
16
1.9
16
93
6
53
13
3
16
66
1.37
29742--29940
68
2.9
68
83
0
245
37
10
16
35
1.83
30422--30465
20
2.2
20
91
0
70
31
13
15
38
1.87
38530--38576
22
2.1
22
88
0
67
34
12
2
51
1.52
39759--39826
16
4.2
16
76
10
68
51
0
1
47
1.09
40361--40405
23
2.0
23
100
0
90
17
40
13
28
1.88
43351--43397
19
2.6
19
83
6
62
42
2
0
55
1.12
44865--45030
73
2.3
74
81
2
183
25
18
16
39
1.92

Tables:   1

The End!