Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398044.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1352.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8609

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
509--1116
164
3.6
168
75
9
517
41
12
12
34
1.80
3081--4254
171
6.9
172
75
4
576
36
11
13
35
1.80
3268--3600
172
2.0
161
82
1
326
36
12
12
35
1.81
3936--4256
165
2.0
164
85
3
439
38
12
12
36
1.81
4535--4947
171
2.4
171
80
6
428
42
11
11
34
1.78
6601--7971
171
8.0
168
72
5
809
37
11
12
33
1.80
8431--8468
16
2.3
17
86
13
53
60
0
7
31
1.25

Tables:   1

The End!