Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398057.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1365.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12677

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1079
173
6.3
171
76
7
925
38
10
14
34
1.80
1577--2420
170
4.9
170
73
5
623
37
10
12
34
1.78
2066--2395
169
2.0
160
77
11
312
38
9
13
35
1.77
2942--4321
171
8.0
170
77
4
1029
36
10
13
35
1.79
2942--3884
341
2.7
331
78
10
875
36
10
13
34
1.80
4494--4863
194
1.9
193
80
3
422
38
9
12
36
1.76
5075--5581
171
3.0
170
77
2
503
38
10
14
34
1.81

Tables:   1

The End!