Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398078.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1386.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24132

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--1694
171
9.9
170
72
6
686
34
12
11
36
1.78
1308--1797
171
2.9
171
77
5
420
36
12
10
37
1.77
5068--5397
171
1.9
171
85
3
450
35
12
13
39
1.82
9902--10220
171
1.9
171
81
0
395
38
11
11
35
1.79
11902--12242
171
2.0
171
84
2
452
36
11
13
34
1.80
12471--12849
171
2.2
171
82
3
449
38
10
11
36
1.76
13450--14529
171
6.3
171
78
3
825
36
11
13
35
1.81
17521--18227
171
4.1
169
75
7
583
38
10
12
34
1.78
18615--19754
171
6.7
170
74
4
680
33
12
10
35
1.79
19969--20616
171
3.8
161
72
10
476
38
10
10
35
1.75
23331--24121
170
4.6
171
77
7
537
35
14
12
35
1.83

Tables:   1

The End!