Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398090.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1397.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30332

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10487--11316
171
4.8
169
74
7
482
34
12
10
38
1.78
10969--11303
172
1.9
172
81
3
397
36
11
11
41
1.77
12046--13031
172
5.7
171
75
3
750
34
13
11
37
1.80
12047--13029
344
2.9
334
76
7
837
34
13
11
37
1.80
12873--13197
170
2.0
160
82
7
318
36
13
8
37
1.76
13845--14312
169
2.7
170
83
2
571
37
11
14
36
1.83
15140--16941
170
10.6
171
72
5
950
34
13
11
37
1.81
17803--18285
168
2.9
157
77
12
353
35
12
10
39
1.78
17267--18391
172
6.6
171
75
5
702
34
13
11
37
1.80
18710--19131
170
2.5
169
81
4
472
36
13
9
38
1.77
18707--19236
170
3.1
170
79
4
428
36
12
10
36
1.77
27054--27946
170
5.2
169
74
6
588
39
10
11
35
1.75

Tables:   1

The End!