Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398113.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1416.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8114

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--769
343
2.3
323
78
10
705
32
12
10
35
1.79
988--1318
172
2.0
161
81
7
376
32
13
9
40
1.77
582--1643
171
6.2
169
73
5
693
34
14
10
35
1.79
1744--3879
171
12.5
170
71
5
1056
35
10
14
33
1.80
3020--3057
18
2.0
20
85
10
53
26
13
15
44
1.83
3887--4418
172
3.1
172
68
4
453
36
11
12
33
1.80
3888--4598
343
2.1
336
78
4
767
35
11
13
32
1.80
7165--7475
170
1.9
160
83
2
329
37
11
13
34
1.81
7012--8104
171
6.4
171
75
2
728
37
12
12
33
1.80

Tables:   1

The End!