Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018398166.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1470.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 888

Length: 1480
ACGTcount: A:0.20, C:0.08, G:0.06, T:0.21

Warning! 650 characters in sequence are not A, C, G, or T


Found at i:571 original size:14 final size:14

Alignment explanation


    Indices: 552--581  Score: 60
    Period size: 14  Copynumber: 2.1  Consensus size: 14

        542 CAAAAGCTTT

                          
        552 ATTACTCGCTTTAA
          1 ATTACTCGCTTTAA

                          
        566 ATTACTCGCTTTAA
          1 ATTACTCGCTTTAA

              
        580 AT
          1 AT

        582 AGTTTTTTAA


Statistics
Matches: 16,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   16  1.00

ACGTcount: A:0.30, C:0.20, G:0.07, T:0.43


Consensus pattern (14 bp):   
ATTACTCGCTTTAA
Done.