Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001008.1 Hibiscus syriacus cultivar Beakdansim tig00002011_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58369

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4255--4293
19
2.1
19
85
9
53
51
0
0
48
1.00
11289--11321
6
5.5
6
100
0
66
15
15
51
18
1.77
13004--13086
36
2.2
36
81
8
96
56
3
2
37
1.30
13521--13558
15
2.5
15
100
0
76
13
15
28
42
1.85
13672--13762
37
2.4
38
82
10
100
52
5
0
41
1.24
15442--15695
124
2.0
125
88
3
377
21
19
16
42
1.88
19011--19039
14
2.1
14
100
0
58
37
20
20
20
1.94
21780--21945
83
2.0
83
97
0
314
30
13
6
50
1.66
27655--27719
24
2.8
24
81
9
73
52
1
0
46
1.10
27852--27906
25
2.3
23
84
6
65
56
1
0
41
1.10
32413--32455
20
2.2
20
100
0
86
62
0
9
27
1.25
44420--44455
14
2.5
15
86
4
56
36
0
0
63
0.94
54389--54421
13
2.5
13
95
5
57
24
0
0
75
0.80

Tables:   1

The End!