Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001010.1 Hibiscus syriacus cultivar Beakdansim tig00002016_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69894

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2140--2187
20
2.4
20
82
0
60
10
29
58
2
1.43
2157--2188
17
1.9
16
93
6
55
9
31
59
0
1.29
3798--3845
20
2.4
19
80
10
60
33
6
16
43
1.73
8325--8432
52
2.1
52
96
0
198
30
4
15
49
1.65
8341--8430
20
4.9
20
69
21
72
33
5
16
44
1.71
22342--22370
8
3.6
8
100
0
58
48
0
13
37
1.43
23838--23910
33
2.2
34
85
7
96
45
12
17
24
1.83
34183--34285
51
2.0
52
88
1
154
32
20
15
32
1.94
36404--36438
10
3.5
10
85
14
54
34
25
0
40
1.56
36570--36903
111
3.0
111
94
0
587
35
8
11
44
1.70
38408--38447
18
2.2
18
90
0
62
27
35
20
17
1.95
41855--41904
2
25.5
2
83
4
66
54
0
0
46
1.00
50487--50533
21
2.3
21
85
3
60
29
0
14
55
1.40
60566--60593
12
2.3
12
100
0
56
32
25
17
25
1.97
65323--65388
34
2.0
33
81
3
78
45
6
4
43
1.49

Tables:   1

The End!