Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001014.1 Hibiscus syriacus cultivar Beakdansim tig00002021_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67693

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6051--6258
20
10.2
20
78
6
222
37
25
18
18
1.93
6051--6258
41
5.1
41
91
1
330
37
25
18
18
1.93
8514--8567
24
2.2
24
93
0
90
40
20
18
20
1.91
8514--8581
24
2.8
24
84
0
64
38
20
17
23
1.93
9421--9472
19
2.7
19
90
3
77
19
19
30
30
1.96
9424--9657
20
11.6
20
77
8
206
19
18
23
37
1.94
9445--9657
41
5.2
41
88
2
304
19
18
23
38
1.93
9422--9699
122
2.3
120
83
8
364
19
18
24
37
1.94
9666--9714
20
2.5
20
90
6
73
12
20
24
42
1.86
9747--9821
20
3.7
20
72
15
64
20
20
25
34
1.96
17333--17371
2
19.5
2
100
0
78
0
48
0
51
1.00
25185--25234
23
2.2
23
88
0
73
14
22
2
62
1.42
27895--27930
18
1.9
19
88
5
56
36
5
2
55
1.38
30199--30228
15
1.9
16
93
6
53
23
0
20
56
1.42
39832--39872
20
2.0
19
86
13
55
43
0
2
53
1.13
40212--40237
2
13.0
2
100
0
52
0
50
0
50
1.00
45905--45932
2
14.0
2
100
0
56
50
0
0
50
1.00
47270--47319
26
1.9
26
95
0
91
44
18
4
34
1.68
52362--52684
162
2.0
160
98
1
619
37
19
23
19
1.94

Tables:   1

The End!