Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001015.1 Hibiscus syriacus cultivar Beakdansim tig00002025_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48201

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1340--1398
24
2.5
23
75
20
59
27
3
23
45
1.68
1358--1397
8
5.0
8
96
0
71
25
2
25
47
1.64
2057--2124
23
3.0
23
86
0
100
17
26
26
29
1.98
4140--4187
21
2.4
20
80
13
55
35
2
0
62
1.07
4208--4244
17
2.1
19
85
10
51
37
5
0
56
1.22
5286--5316
16
1.9
16
100
0
62
51
19
9
19
1.74
9603--9657
28
2.0
28
85
0
74
30
10
18
40
1.85
13890--13952
3
21.0
3
78
18
69
65
0
31
3
1.09
19334--19358
6
4.2
6
100
0
50
32
16
36
16
1.90
22064--22134
36
2.0
36
86
5
99
40
9
11
38
1.74
25040--25100
20
3.0
20
97
0
113
40
16
24
18
1.90

Tables:   1

The End!