Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000102.1 Hibiscus syriacus cultivar Beakdansim tig00000186_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70738

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2103--2170
35
1.9
36
87
3
102
30
36
2
29
1.72
2614--2642
14
2.0
15
93
6
51
79
0
20
0
0.74
6018--6102
11
7.2
11
72
22
66
31
36
3
28
1.74
6015--6119
36
2.9
36
95
1
185
30
36
4
28
1.78
10018--10063
15
2.9
16
84
12
60
60
0
30
8
1.26
11627--11673
19
2.6
18
83
12
60
65
0
14
19
1.26
12078--12128
20
2.6
20
90
3
77
45
5
13
35
1.68
13911--13962
26
2.0
25
92
3
86
82
11
5
0
0.82
17301--17351
19
2.6
20
90
3
77
43
5
13
37
1.69
19103--19139
15
2.4
16
90
4
58
13
10
5
70
1.32
19491--19515
11
2.3
11
100
0
50
92
8
0
0
0.40
19498--19541
19
2.2
20
88
4
63
79
13
6
0
0.92
23805--23841
15
2.4
16
90
4
58
13
10
5
70
1.32
26259--26327
33
2.1
33
83
5
86
30
36
1
31
1.67
31240--31299
23
2.5
22
74
12
57
63
11
15
10
1.52
37134--37219
13
7.2
12
72
22
58
29
3
37
30
1.74
37116--37220
36
2.9
36
95
1
185
28
4
36
30
1.78
37563--37608
18
2.5
18
82
3
56
47
6
13
32
1.68
45350--45388
17
2.2
18
86
13
55
0
15
7
76
0.99
45772--45851
35
2.2
37
91
4
128
27
3
37
31
1.74
50545--50599
11
4.9
11
73
18
51
78
1
18
1
0.94
50546--50611
34
2.0
34
88
8
100
75
3
16
4
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50804--50838
17
2.0
18
88
5
54
11
28
0
60
1.32
54793--54832
19
2.0
20
85
4
55
22
12
0
65
1.26
55097--55151
11
4.9
11
73
18
51
78
1
18
1
0.94
55098--55163
34
2.0
34
88
8
100
75
3
16
4
1.09
59342--59381
19
2.0
20
85
4
55
22
12
0
65
1.26
59646--59700
11
4.9
11
73
18
51
78
1
18
1
0.94
59647--59712
34
2.0
34
88
8
100
75
3
16
4
1.09
63889--63928
19
2.0
20
85
4
55
22
12
0
65
1.26
67225--67264
19
2.0
20
85
4
55
22
15
0
62
1.32
67515--67553
17
2.3
17
82
8
53
82
0
17
0
0.68
68765--68807
21
2.0
22
90
4
70
39
6
6
46
1.58
70411--70440
15
1.9
16
93
6
53
76
3
20
0
0.92

Tables:   1

The End!