Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001029.1 Hibiscus syriacus cultivar Beakdansim tig00002049_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50412

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8563--9184
177
3.5
175
82
7
690
17
28
13
40
1.88
15104--15203
2
50.5
2
92
5
168
47
1
1
51
1.14
17971--18096
50
2.5
50
80
0
144
16
36
26
20
1.94
18365--18592
111
2.1
111
94
0
402
36
7
10
44
1.69
22627--22727
40
2.5
41
82
10
120
16
29
33
19
1.94
28794--28869
32
2.5
31
72
12
75
32
13
0
53
1.39
29137--29216
40
2.0
39
92
2
133
26
20
13
40
1.89
29723--29781
30
2.0
30
87
9
86
28
3
1
66
1.18
29726--29788
29
2.2
29
83
11
76
31
3
1
63
1.19
30898--31057
58
2.7
59
77
6
164
33
21
1
43
1.63
30912--31057
60
2.5
58
76
8
143
32
21
2
43
1.65
38375--38412
2
18.5
2
94
5
67
50
2
0
47
1.15
42173--42214
21
2.0
21
90
9
68
23
19
28
28
1.98
49336--49394
29
2.0
29
100
0
118
23
13
13
49
1.78

Tables:   1

The End!