Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000103.1 Hibiscus syriacus cultivar Beakdansim tig00000187_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47333

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5238--5330
30
3.1
30
89
4
127
31
27
20
20
1.97
5319--5417
31
3.2
31
81
11
139
33
19
18
29
1.95
6247--6307
2
30.5
2
100
0
122
49
0
0
50
1.00
6781--6825
21
2.1
21
87
0
63
15
24
28
31
1.96
9523--9611
30
3.0
30
91
1
135
31
26
21
20
1.98
9607--9707
31
3.2
31
80
8
132
33
18
18
28
1.95
10536--10602
2
33.5
2
100
0
134
49
0
0
50
1.00
11075--11119
21
2.1
21
87
0
63
15
24
28
31
1.96
12388--12422
12
2.9
12
86
0
52
2
42
0
54
1.15
12770--12841
36
2.0
36
97
0
135
33
27
12
26
1.92
13295--13358
20
3.3
19
75
16
60
32
23
20
23
1.98
13614--13685
22
3.3
22
74
18
69
23
16
25
34
1.95
24609--24646
14
2.7
14
84
11
51
21
10
28
39
1.86
25496--25554
28
2.1
29
90
3
93
49
10
10
30
1.70
26525--26592
21
3.1
21
82
12
82
2
45
0
51
1.16
26544--26590
6
7.8
6
95
0
85
2
48
0
48
1.13
29655--29719
30
2.2
29
83
5
76
38
12
12
36
1.80
37419--37461
16
2.7
16
92
0
68
32
32
13
20
1.92
38320--38357
20
2.0
20
89
5
60
39
28
0
31
1.57
39241--39297
29
1.9
30
85
3
80
35
17
7
40
1.77
42997--43033
2
18.5
2
100
0
74
48
0
0
51
1.00
45252--45312
23
2.7
23
89
0
104
16
26
27
29
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45667--45697
13
2.4
13
94
0
53
25
6
9
58
1.54

Tables:   1

The End!