Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001030.1 Hibiscus syriacus cultivar Beakdansim tig00002051_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63739

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
525--549
12
2.1
12
100
0
50
48
0
0
52
1.00
815--925
40
2.9
40
75
18
110
18
13
18
49
1.79
1091--1181
21
3.9
22
71
13
58
47
1
0
51
1.07
1119--1199
26
3.0
28
74
17
71
48
1
0
50
1.08
1097--1142
21
2.2
21
88
0
65
45
0
0
54
0.99
1347--1404
27
2.1
27
84
12
75
62
1
0
36
1.06
1583--1617
14
2.5
14
85
0
52
34
17
11
37
1.85
3545--3581
5
7.6
5
93
6
67
59
0
40
0
0.97
4705--4768
28
2.4
26
76
19
69
56
1
3
39
1.25
10173--10205
2
16.5
2
100
0
66
51
0
0
48
1.00
14603--14632
14
2.1
14
100
0
60
43
0
13
43
1.43
17463--17561
33
3.1
33
91
2
157
23
15
24
37
1.93
20210--20249
21
1.9
21
94
0
71
35
25
25
15
1.94
22201--22299
33
3.1
33
91
2
157
23
15
24
37
1.93
24297--24339
22
2.0
22
100
0
86
51
4
13
30
1.62
25759--25932
60
2.9
59
77
2
177
33
20
4
41
1.71
32324--32357
7
4.7
7
89
7
50
29
0
2
67
1.05
32324--32357
15
2.4
14
90
5
50
29
0
2
67
1.05
32547--32617
32
2.2
32
84
0
88
39
5
16
38
1.73
33259--33333
36
2.1
35
92
2
123
33
9
9
48
1.68
33904--33964
25
2.5
25
89
2
97
49
1
4
44
1.33
36964--37041
39
2.0
39
97
0
147
42
15
16
25
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43191--43219
12
2.3
13
94
5
51
82
0
13
3
0.79
58672--58696
6
4.2
6
100
0
50
84
0
0
16
0.63

Tables:   1

The End!