Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001031.1 Hibiscus syriacus cultivar Beakdansim tig00002053_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73843

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1502--1822
162
2.0
158
96
2
597
38
19
23
19
1.94
9531--9596
29
2.3
29
100
0
132
39
15
13
31
1.86
17459--17557
34
2.9
34
87
0
144
55
4
3
37
1.34
18264--18304
8
5.2
8
82
5
57
36
29
0
34
1.58
23551--23589
2
19.5
2
100
0
78
51
0
0
48
1.00
24054--24101
2
24.0
2
100
0
96
50
0
0
50
1.00
25843--25905
27
2.3
26
91
2
99
15
34
9
39
1.80
32284--32335
26
2.0
26
96
0
95
44
1
11
42
1.51
47500--47524
2
12.5
2
100
0
50
48
0
0
52
1.00
59778--59836
29
2.1
29
81
9
77
61
6
0
32
1.22
59812--59875
29
2.2
30
78
16
71
73
7
0
18
1.07
71295--71395
7
14.4
7
81
0
76
24
0
31
43
1.55
71328--71395
28
2.4
28
85
9
86
25
0
29
45
1.54

Tables:   1

The End!