Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001036.1 Hibiscus syriacus cultivar Beakdansim tig00002059_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69671

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2263--2312
20
2.7
18
73
11
55
40
16
12
32
1.84
9044--9098
26
2.2
25
93
3
92
43
14
21
20
1.87
12202--12227
12
2.2
12
100
0
52
53
7
15
23
1.67
18570--18616
17
2.6
17
83
12
51
23
8
0
68
1.17
20101--20164
18
3.8
17
76
19
71
60
1
0
37
1.06
20164--20216
22
2.3
23
78
12
56
52
3
0
43
1.19
24590--24643
21
2.5
22
79
11
58
51
5
3
38
1.43
26585--26635
19
2.6
19
81
3
57
33
27
13
25
1.94
26670--26736
20
3.3
20
78
0
80
41
17
17
22
1.90
26790--26833
20
2.2
20
87
0
61
25
29
15
29
1.96
26860--27024
40
3.9
41
78
8
163
28
26
13
30
1.94
26873--27071
20
9.6
20
71
10
139
27
26
14
31
1.95
26898--27095
88
2.3
87
85
0
261
25
26
15
32
1.96
27090--27129
20
2.0
20
95
0
71
27
20
27
25
1.99
27146--27400
20
12.2
20
78
7
105
26
25
16
31
1.96
27154--27437
40
6.8
40
76
9
194
26
26
16
31
1.97
27190--27441
20
12.1
20
78
6
189
25
25
16
32
1.96
27152--27392
129
1.9
129
84
1
331
26
26
16
30
1.96
27170--27372
109
1.9
109
85
0
280
25
25
16
32
1.96
27465--27561
20
4.8
20
83
0
104
35
15
22
26
1.94
27586--27655
20
3.5
20
90
0
113
18
18
20
42
1.89
27561--27657
40
2.4
42
80
13
114
16
17
21
44
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30387--30456
27
2.6
28
82
12
78
35
4
30
30
1.77
33205--33437
31
7.5
31
96
0
403
38
21
19
20
1.93
36929--36953
12
2.1
12
100
0
50
20
48
0
32
1.50
37713--37948
31
7.6
31
97
0
436
39
22
19
18
1.92
39708--39936
64
3.6
63
80
7
255
27
18
19
33
1.96
44523--44751
64
3.6
63
81
7
264
27
19
19
33
1.96
57215--57251
19
1.9
19
89
10
58
45
8
13
32
1.73
62798--63282
55
8.8
55
85
4
476
32
23
15
28
1.95
62820--63282
110
4.2
110
86
2
572
31
24
15
28
1.95
62823--63282
165
2.8
164
83
5
536
32
23
15
28
1.95
64672--64867
14
14.2
14
67
18
76
9
16
0
73
1.09
64676--64832
57
2.8
53
75
18
129
9
18
0
71
1.12
64747--64854
11
10.6
10
75
17
73
11
15
0
73
1.10
64740--64867
61
2.2
57
83
10
168
10
15
0
74
1.07
64677--64867
105
1.8
104
83
10
255
9
17
0
73
1.09

Tables:   1

The End!