Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001039.1 Hibiscus syriacus cultivar Beakdansim tig00002065_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55456

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7625--7661
19
1.9
19
89
10
58
45
8
13
32
1.73
13225--13710
55
8.8
55
85
5
534
31
24
14
28
1.95
15065--15258
7
29.6
7
66
21
57
10
16
0
72
1.11
15066--15110
14
3.1
14
84
15
65
4
17
0
77
0.92
15141--15241
9
10.3
9
76
19
64
10
14
0
74
1.08
15141--15247
19
5.6
18
76
14
90
11
14
0
74
1.07
15122--15247
19
6.6
17
73
18
81
11
14
0
74
1.07
15141--15241
11
10.2
10
76
15
79
10
14
0
74
1.08
15057--15254
103
1.9
103
82
13
248
10
16
0
73
1.10
15130--15240
59
1.9
58
87
9
163
10
15
0
73
1.08
24882--24978
45
2.1
46
88
7
144
39
20
12
27
1.89
25317--25414
45
2.1
47
84
5
128
40
19
10
29
1.84
24812--25682
436
2.0
435
97
0
1625
28
24
17
29
1.97
30057--30121
23
2.8
23
79
6
60
50
0
1
47
1.10
44068--44098
16
1.9
16
93
0
53
48
19
12
19
1.81

Tables:   1

The End!