Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001040.1 Hibiscus syriacus cultivar Beakdansim tig00002066_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75899

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2672--3283
44
13.9
43
67
5
202
29
20
21
29
1.98
2634--3290
133
5.0
133
87
3
896
29
20
21
29
1.98
2536--3283
266
2.8
265
84
4
975
29
20
20
29
1.98
3660--4177
39
13.9
36
84
6
257
36
16
20
27
1.93
3702--3794
15
5.4
15
68
26
60
37
16
25
20
1.93
3851--4377
39
13.6
39
90
1
738
35
17
18
29
1.93
3973--4035
20
3.2
20
65
13
58
33
20
19
26
1.96
6687--6745
30
2.0
30
86
6
84
50
15
16
16
1.78
10294--10351
31
2.0
30
90
10
93
36
0
34
29
1.58
10294--10379
28
3.0
30
79
17
94
34
0
34
30
1.58
10319--10382
28
2.3
29
89
5
96
35
0
34
29
1.58
11961--12015
27
2.0
27
100
0
110
56
3
10
29
1.51
38089--38321
87
2.5
92
79
15
277
30
15
25
28
1.95
39305--39561
132
2.0
125
93
5
433
18
10
25
45
1.81
42163--42239
37
2.1
37
95
0
136
40
11
24
23
1.88
56269--56441
59
2.9
57
80
7
170
43
5
19
32
1.73
60405--60468
33
1.9
33
90
0
101
25
31
32
10
1.90
60432--60495
23
2.8
23
92
0
83
23
28
40
7
1.82
60499--60554
29
1.9
29
96
0
103
19
30
37
12
1.89
74888--74920
13
2.5
13
90
0
57
9
27
24
39
1.85

Tables:   1

The End!