Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001045.1 Hibiscus syriacus cultivar Beakdansim tig00002073_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77298

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3154--3206
21
2.5
21
78
0
61
20
24
16
37
1.93
3196--3328
20
6.7
20
92
0
221
42
21
17
19
1.90
3328--3397
20
3.5
20
98
0
131
27
27
18
27
1.98
3319--3397
40
2.0
40
92
0
131
29
27
18
24
1.98
3762--3837
33
2.3
34
97
2
145
11
23
19
44
1.84
3784--3837
14
3.5
14
73
22
54
11
24
20
44
1.83
3942--3978
14
2.6
14
86
0
56
48
21
0
29
1.50
5902--5970
20
3.5
20
89
0
102
37
24
18
18
1.94
6019--6211
20
10.3
20
82
13
216
19
18
20
41
1.90
8082--8122
20
2.0
20
95
0
73
58
19
12
9
1.61
8107--8158
20
2.6
20
78
0
59
38
26
19
15
1.91
8509--8574
22
3.0
22
86
0
96
21
15
37
25
1.92
8770--8822
20
2.7
20
96
0
97
18
20
22
37
1.94
8812--8864
21
2.5
21
81
0
70
37
16
24
20
1.93
15312--15395
26
3.3
26
74
12
102
34
8
7
50
1.60
15310--15406
50
1.9
50
97
0
185
35
7
9
48
1.63
15327--15406
26
3.2
26
70
13
85
36
7
11
45
1.68
24897--24930
17
2.0
17
100
0
68
29
23
5
41
1.78
30511--30683
92
1.9
94
92
2
296
21
29
15
34
1.94
32974--33126
24
6.4
24
82
6
139
39
20
12
26
1.88
32974--33126
48
3.2
48
87
5
202
39
20
12
26
1.88
32991--33129
24
5.8
24
84
6
174
39
20
14
25
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34117--34181
26
2.5
26
92
0
94
26
24
18
30
1.98
34125--34181
26
2.2
26
96
0
105
26
24
21
28
1.99
37061--37606
271
2.0
271
100
0
1092
37
9
9
43
1.70
37585--37653
2
35.0
2
97
2
131
50
0
0
49
1.00
39812--39894
31
2.7
31
90
3
123
38
4
4
51
1.44
40497--40555
17
3.4
17
75
11
57
50
0
0
49
1.00
41028--41053
3
8.7
3
100
0
52
30
0
0
69
0.89
41349--41387
3
13.0
3
100
0
78
66
0
0
33
0.92
49136--49181
21
2.2
20
84
3
56
52
4
4
39
1.41
49879--49918
6
6.7
6
100
0
80
67
0
17
15
1.23
55873--56065
30
6.4
30
96
0
359
33
23
18
23
1.97
56051--56143
31
3.0
31
79
3
98
34
21
17
26
1.95
60310--60592
30
9.4
30
100
0
566
32
23
20
23
1.98
60968--61016
2
24.5
2
100
0
98
48
0
0
51
1.00
65708--65753
23
2.0
22
83
4
56
50
4
19
26
1.66
72337--72386
25
2.0
25
100
0
100
8
8
36
48
1.62

Tables:   1

The End!