Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001046.1 Hibiscus syriacus cultivar Beakdansim tig00002075_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  125993

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3885--3916
15
2.1
15
100
0
64
43
9
6
40
1.62
6616--6743
2
60.0
2
70
17
62
8
42
3
44
1.53
6669--6741
22
3.2
22
88
7
110
6
46
4
42
1.49
6660--6743
16
5.4
16
78
13
86
7
45
4
42
1.52
6669--6743
24
3.2
24
94
3
127
6
46
4
42
1.48
6935--6982
22
2.2
22
96
0
87
6
47
0
45
1.27
6935--6992
22
2.7
22
89
5
75
5
46
1
46
1.35
7281--7305
8
3.1
8
100
0
50
12
52
0
36
1.39
8632--8680
20
2.2
24
82
13
61
10
12
2
75
1.13
8742--8784
2
22.5
2
82
17
56
44
2
0
53
1.13
8838--9053
12
17.6
13
70
17
63
17
1
0
80
0.81
8843--8952
21
5.1
21
73
21
70
21
1
0
75
0.95
8858--9044
8
22.8
8
84
6
232
14
1
0
83
0.73
8925--9044
1
120.0
1
79
0
132
10
0
0
90
0.47
23377--23402
10
2.6
10
100
0
52
15
0
7
76
0.99
25926--25997
2
36.0
2
94
5
128
48
0
1
50
1.09
31722--31853
63
2.1
63
97
0
246
29
10
16
43
1.82
39673--39869
59
3.3
59
82
4
220
45
10
17
26
1.80
42808--43072
43
6.2
43
82
1
300
34
19
23
23
1.97
42826--43068
128
1.9
128
86
1
344
34
17
23
24
1.96
42808--43072
85
3.1
86
83
1
309
34
19
23
23
1.97
45654--45682
15
1.9
15
100
0
58
20
6
13
58
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46387--46476
45
2.0
45
91
4
146
52
10
17
20
1.73
49724--49769
2
22.5
2
95
4
83
47
0
2
50
1.13
50356--50411
5
10.2
5
78
17
58
17
51
23
7
1.70
50361--50417
18
3.2
18
97
2
107
17
49
22
10
1.77
50435--50573
29
4.9
28
71
10
84
33
5
20
40
1.77
50530--50614
29
2.9
29
83
0
98
31
4
22
41
1.74
57522--57568
18
2.6
18
96
0
85
17
48
19
14
1.81
57578--57737
29
5.6
29
76
7
121
30
5
21
43
1.73
57690--57758
29
2.3
30
87
2
95
33
5
21
39
1.77
60059--60107
24
2.0
24
88
0
71
22
6
8
63
1.44
61367--61409
22
1.9
23
90
4
70
25
0
9
65
1.22
73269--73311
21
2.0
21
86
0
59
48
4
20
25
1.69
73957--73982
9
2.9
9
100
0
52
34
0
46
19
1.50
79567--79593
2
13.5
2
100
0
54
51
0
0
48
1.00
79968--80011
21
2.0
22
86
4
63
52
4
29
13
1.60
82886--83527
323
2.0
319
93
1
1088
30
16
17
35
1.92
104352--104386
18
1.9
18
88
0
52
22
37
0
40
1.55
116138--116168
16
1.9
16
93
0
53
19
12
19
48
1.81

Tables:   1

The End!