Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001047.1 Hibiscus syriacus cultivar Beakdansim tig00002077_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48882

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1698--2037
114
3.0
113
91
1
536
30
19
15
34
1.92
4159--4221
7
9.4
7
73
20
55
3
11
1
84
0.81
4151--4219
11
5.9
11
79
17
59
2
13
1
82
0.85
7828--7852
8
3.1
8
100
0
50
64
0
12
24
1.27
9365--9410
17
2.7
18
80
16
53
71
0
2
26
0.97
9809--9866
25
2.2
28
78
12
68
55
1
0
43
1.10
10019--10062
22
2.1
20
83
8
52
68
2
2
27
1.14
11482--11554
15
5.1
14
76
15
69
50
0
0
49
1.00
11470--11568
27
3.7
27
87
2
112
47
0
0
52
1.00
11487--11568
24
3.4
24
89
3
112
50
0
0
50
1.00
11472--11563
30
3.2
30
84
9
111
45
0
0
54
0.99
11502--11563
3
20.7
3
93
0
61
45
0
0
54
0.99
13229--13280
23
2.2
23
83
16
63
42
7
0
50
1.31
13556--13581
2
13.0
2
100
0
52
50
0
0
50
1.00
13749--13836
38
2.4
38
88
3
135
27
14
2
55
1.51
13764--13828
20
3.3
20
65
16
55
30
13
3
52
1.56
13821--13888
12
5.4
13
82
10
70
25
23
0
51
1.48
14054--14115
30
2.2
29
77
16
67
33
22
19
24
1.97
17403--17460
4
14.2
4
82
10
57
70
1
5
22
1.16
19674--20345
105
6.4
105
94
0
1121
22
18
26
32
1.97
19674--20345
211
3.2
211
94
0
1150
22
18
26
32
1.97
21080--21179
52
1.9
52
85
4
139
13
24
14
49
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30573--30616
20
2.2
20
88
8
63
72
2
6
18
1.17
31655--31700
4
11.0
4
86
4
56
67
0
6
26
1.15
32061--32092
11
2.9
11
100
0
64
71
0
28
0
0.86
34739--34778
20
2.0
20
100
0
80
45
10
10
35
1.71

Tables:   1

The End!