Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001052.1 Hibiscus syriacus cultivar Beakdansim tig00002082_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58356

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3529--3588
23
2.7
23
73
17
63
41
0
3
55
1.16
3706--3776
24
3.0
24
83
8
74
53
1
1
43
1.18
3733--3775
10
3.9
10
78
21
50
55
0
0
44
0.99
3864--3899
14
2.6
14
90
0
54
55
2
0
41
1.14
4046--4072
14
1.9
14
100
0
54
44
7
3
44
1.49
13486--13530
16
2.6
18
89
6
67
46
4
0
48
1.22
13510--13547
19
2.0
20
89
5
60
57
2
0
39
1.12
13502--13536
16
2.2
16
90
5
54
54
2
0
42
1.15
20662--20723
23
2.8
22
81
13
74
24
32
22
20
1.98
28728--28772
2
22.5
2
100
0
90
48
0
0
51
1.00
35881--35955
28
2.6
27
83
12
87
40
1
0
58
1.06
48208--48246
20
2.0
20
100
0
78
53
10
10
25
1.66

Tables:   1

The End!