Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001057.1 Hibiscus syriacus cultivar Beakdansim tig00002092_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  94602

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5705--5753
21
2.3
21
92
0
80
20
12
28
38
1.89
13909--13997
18
4.9
18
95
0
151
30
31
20
17
1.96
14811--14860
19
2.6
19
90
0
82
20
26
24
30
1.98
28736--28778
16
2.6
17
77
3
52
44
39
2
13
1.57
31277--31316
18
2.2
18
86
0
53
45
7
5
42
1.54
41696--41725
5
5.8
5
92
7
51
16
0
0
83
0.65
45405--45443
20
2.0
20
90
10
62
20
10
5
64
1.44
51905--51951
24
2.0
24
86
0
67
23
10
19
46
1.80
52386--52473
31
2.8
31
81
8
106
35
4
10
50
1.57
57174--57202
6
4.8
6
100
0
58
0
34
0
65
0.93
87398--87666
123
2.2
123
90
5
420
31
12
7
48
1.68
89764--89816
13
4.1
13
95
0
88
18
52
13
15
1.74
94255--94294
12
3.0
14
85
14
66
15
55
15
15
1.71

Tables:   1

The End!