Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001064.1 Hibiscus syriacus cultivar Beakdansim tig00002104_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86231

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5032--5106
37
2.0
37
86
0
105
22
29
8
40
1.82
5210--5307
45
2.2
45
87
3
135
30
23
5
40
1.76
10898--10950
20
2.7
19
82
8
61
22
13
33
30
1.92
12701--12779
34
2.4
34
97
2
151
44
12
13
29
1.81
15287--15346
29
2.1
29
81
6
68
43
5
13
38
1.66
16764--16788
2
12.5
2
100
0
50
48
0
0
52
1.00
16949--17055
52
2.0
54
96
3
200
28
40
1
28
1.67
20038--20094
28
2.0
28
96
0
105
31
21
21
26
1.98
21220--21276
27
2.1
27
86
0
78
43
3
5
47
1.43
21244--21309
23
2.7
25
81
9
82
43
1
7
46
1.41
21367--21412
22
2.2
21
84
7
58
43
6
4
45
1.49
32897--32939
21
2.0
21
100
0
86
30
32
4
32
1.78
35026--35063
15
2.3
17
78
21
53
28
34
26
10
1.90
35032--35066
15
2.3
15
100
0
70
28
34
22
14
1.93
36463--36505
22
1.9
23
81
13
54
37
16
6
39
1.75
44877--44915
20
2.0
20
100
0
78
25
33
30
10
1.89
48923--48990
35
1.9
35
100
0
136
29
20
20
29
1.98
54934--55067
68
1.9
70
83
4
173
33
12
15
38
1.86
62381--62433
27
2.0
27
85
3
72
54
15
1
28
1.51
67344--67386
19
2.1
21
87
8
63
20
11
20
46
1.82
73880--73927
17
3.0
15
81
9
51
33
4
0
62
1.14
74027--74079
5
10.4
5
80
11
54
26
1
0
71
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74030--74082
19
2.5
22
79
11
67
28
1
0
69
0.99
74024--74087
14
4.6
15
70
16
57
26
1
0
71
0.94
74018--74084
27
2.4
27
82
7
73
26
2
0
70
1.02
74185--74229
18
2.6
17
83
13
56
15
13
0
71
1.15
74183--74229
17
2.7
17
81
12
60
14
12
0
72
1.13
77378--77419
10
3.7
11
79
17
50
78
2
16
2
0.96
77393--77430
13
3.0
13
85
14
53
76
2
15
5
1.08
77383--77430
23
2.0
23
88
8
69
77
2
16
4
1.03
77500--77637
69
2.0
69
95
0
249
37
23
13
25
1.92
79024--79110
36
2.4
36
90
1
140
27
21
12
37
1.90
78939--79162
100
2.2
99
84
4
272
29
20
12
37
1.89
79059--79251
64
2.9
64
81
9
194
32
19
9
38
1.84
79938--80207
109
2.5
105
78
12
300
34
23
17
24
1.96
81498--81570
16
4.3
16
75
13
56
28
4
0
67
1.09
81505--81572
36
1.9
36
82
8
86
27
4
0
67
1.09
81629--81689
17
3.5
17
72
16
61
26
6
1
65
1.26
81934--81984
9
6.2
8
77
18
52
13
0
5
80
0.89
81936--81992
25
2.3
26
88
11
84
14
1
5
78
0.99
81934--81998
16
4.2
14
79
12
58
12
3
4
80
0.99

Tables:   1

The End!