Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001068.1 Hibiscus syriacus cultivar Beakdansim tig00002115_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  90142

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9632--9697
28
2.4
28
80
19
84
39
33
7
19
1.80
11570--11609
20
2.0
20
85
9
55
67
0
7
25
1.16
15517--15564
21
2.3
21
96
0
87
39
16
18
25
1.91
18964--19035
21
3.4
21
92
0
117
40
19
18
22
1.92
19876--19906
15
2.1
15
93
0
53
41
22
9
25
1.84
22407--22458
21
2.3
23
87
6
72
34
11
17
36
1.86
22422--22466
21
2.1
21
87
0
63
35
15
17
31
1.92
22522--22579
21
2.8
21
89
0
89
41
20
15
22
1.90
23963--23995
17
2.0
17
94
5
59
57
0
30
12
1.35
25222--25265
19
2.3
19
84
7
54
50
2
9
38
1.47
25280--25330
21
2.4
21
96
0
93
41
17
17
23
1.90
39585--39673
44
2.0
44
93
0
151
26
21
16
34
1.95
54794--54835
15
2.8
15
92
0
66
35
19
14
30
1.91
60877--60915
20
1.9
21
89
5
62
35
7
23
33
1.83
64196--64245
14
3.6
14
75
5
57
60
0
2
38
1.09
64423--64482
2
30.0
2
100
0
120
50
0
0
50
1.00
64706--64777
30
2.4
29
81
6
81
30
4
18
47
1.67
65155--65238
42
2.0
42
92
0
141
54
9
2
33
1.46
71919--71971
23
2.3
23
83
0
61
9
16
18
54
1.69
72938--72972
14
2.5
14
90
0
52
45
0
54
0
0.99
73690--73740
23
2.2
23
78
0
57
35
13
9
41
1.78
76883--76912
15
1.9
16
93
6
53
46
0
6
46
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77374--77770
131
3.0
131
86
2
544
41
17
10
31
1.82
79961--80411
135
3.4
133
78
6
412
31
16
20
31
1.94
82996--83499
59
8.6
59
90
2
748
33
18
14
34
1.91
83817--83869
22
2.5
20
80
11
61
26
26
15
32
1.95
83817--84133
95
3.4
94
85
4
415
26
24
15
32
1.95

Tables:   1

The End!