Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001071.1 Hibiscus syriacus cultivar Beakdansim tig00002120_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71307

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6436--6475
3
13.3
3
89
10
64
0
35
0
65
0.93
16590--16641
23
2.3
23
93
0
86
48
7
0
44
1.31
18339--18368
15
2.0
15
93
0
51
56
6
0
36
1.26
19763--19790
13
2.2
13
100
0
56
42
0
0
57
0.99
40096--40225
27
4.7
27
77
5
109
49
4
4
41
1.44
40152--40256
27
3.8
27
83
10
106
49
1
3
44
1.31
40096--40255
83
1.9
84
79
7
182
50
3
4
41
1.40
47037--47075
14
2.7
15
88
4
62
51
2
0
46
1.14
53725--53839
53
2.1
54
88
1
169
28
12
16
42
1.84
68986--69015
13
2.3
13
94
0
51
43
23
26
6
1.78

Tables:   1

The End!