Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001076.1 Hibiscus syriacus cultivar Beakdansim tig00002131_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85692

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2358--2396
16
2.6
14
84
15
51
30
0
0
69
0.89
2364--2396
15
2.2
16
89
10
52
27
0
0
72
0.85
2813--2838
2
13.0
2
100
0
52
50
0
0
50
1.00
2825--4063
423
3.0
416
90
4
1898
38
18
13
30
1.89
5835--5861
2
13.5
2
100
0
54
51
0
0
48
1.00
15108--15138
2
16.0
2
93
6
55
48
0
0
51
1.00
30749--30862
56
2.0
56
91
0
183
46
9
8
35
1.68
32389--32439
24
2.1
24
85
3
66
31
13
7
47
1.72
35831--35860
15
2.0
15
93
0
51
50
0
0
50
1.00
46537--46613
33
2.3
33
88
0
109
28
5
19
46
1.71
46881--46952
31
2.4
30
83
2
90
50
12
6
30
1.66
46980--47020
21
1.9
22
85
14
59
36
4
9
48
1.58
67282--67362
30
2.7
30
81
9
94
46
4
4
43
1.46
68812--68872
23
2.7
23
80
10
70
45
6
11
36
1.66
69209--69268
31
2.0
31
86
3
86
55
8
10
26
1.61
72970--73002
11
3.0
11
95
0
57
15
21
0
63
1.30
74518--74576
18
3.4
18
76
6
59
30
3
3
62
1.28
82876--82909
17
2.0
17
94
0
59
38
5
20
35
1.77

Tables:   1

The End!