Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001089.1 Hibiscus syriacus cultivar Beakdansim tig00002150_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50819

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5728--5812
35
2.5
33
78
14
91
27
8
10
54
1.63
11072--11167
28
3.4
27
77
7
84
29
1
15
54
1.48
18705--18758
18
2.9
19
83
5
58
18
38
9
33
1.83
23209--23284
25
3.2
25
65
24
65
35
17
13
34
1.88
23202--23313
45
2.5
45
86
1
154
38
15
13
33
1.86
29123--29504
105
3.7
105
79
6
321
36
14
11
37
1.82
29120--29628
103
4.9
102
79
7
442
36
13
11
38
1.81
29267--29628
100
3.6
99
81
9
376
36
13
9
39
1.79
36145--36190
12
3.7
13
82
8
51
6
13
2
78
1.04
36152--36190
18
2.2
18
90
0
60
7
12
2
76
1.09
36283--36320
11
3.5
11
92
0
58
23
23
23
28
1.99
37727--37777
11
5.0
10
86
13
61
15
0
5
78
0.93
37727--37777
5
10.0
5
80
19
61
15
0
5
78
0.93
37727--37777
16
3.3
15
80
20
61
15
0
5
78
0.93
37727--37775
21
2.4
21
90
10
75
16
0
6
77
0.96
39182--39224
19
2.2
20
87
8
61
48
0
2
48
1.14
45672--45718
22
2.1
23
84
4
60
23
10
25
40
1.87

Tables:   1

The End!