Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001091.1 Hibiscus syriacus cultivar Beakdansim tig00002157_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65805

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
536--560
13
1.9
13
100
0
50
52
0
0
48
1.00
1793--1870
31
2.5
31
79
2
95
28
12
11
47
1.76
16573--16641
30
2.2
30
82
15
86
36
5
15
42
1.72
16582--16641
29
2.0
30
90
6
95
35
6
15
43
1.72
16721--16799
21
3.8
21
96
0
149
20
40
18
20
1.92
16721--16840
42
2.8
43
86
8
158
22
36
19
21
1.95
16861--16928
20
3.3
20
81
4
91
17
27
23
30
1.97
16861--16943
41
2.0
41
86
4
114
20
27
24
27
1.99
17026--17065
20
1.9
22
90
10
66
37
37
10
15
1.80
17663--17792
63
2.1
63
100
0
260
27
34
20
16
1.95
19564--19632
30
2.2
30
85
15
95
36
5
15
42
1.72
19573--19632
29
2.0
30
93
6
104
35
6
15
43
1.72
19712--19882
20
8.7
20
71
15
81
23
30
20
25
1.99
24643--24681
3
12.7
3
84
15
53
69
0
0
30
0.89
34199--34292
20
4.4
20
71
22
75
44
4
6
44
1.49
34201--34354
46
3.3
48
80
10
142
45
3
6
44
1.48
34245--34354
48
2.3
48
86
6
145
45
2
6
45
1.43
34232--34354
48
2.6
46
82
8
142
46
4
6
43
1.48
34340--34462
43
2.8
43
86
8
153
43
1
8
47
1.43
36979--37023
17
2.9
15
81
12
54
24
0
6
68
1.13
58531--58555
12
2.1
12
100
0
50
32
8
20
40
1.81

Tables:   1

The End!