Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01000110.1 Hibiscus syriacus cultivar Beakdansim tig00000194_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 66460
ACGTcount: A:0.35, C:0.19, G:0.15, T:0.32
Found at i:6885 original size:39 final size:39
Alignment explanation
Indices: 6775--6893 Score: 129
Period size: 39 Copynumber: 3.1 Consensus size: 39
6765 TAAATTTTTT
* * *
6775 ATTCATAA-TTCTCAAATTATTTCAC-TCTAACATTCTAA
1 ATTCTTAATTTCTTAAATTATTTCACAT-TAACATTATAA
* *
6813 ATTCTTAATTTCTTAAATT-TTGCAACCA-CAACATTATAA
1 ATTCTTAATTTCTTAAATTATTTC-A-CATTAACATTATAA
*
6852 ATTCTTAATTTCTTAAATTATTTCACATTAACATTTTAA
1 ATTCTTAATTTCTTAAATTATTTCACATTAACATTATAA
6891 ATT
1 ATT
6894 ATTTTTAAAA
Statistics
Matches: 67, Mismatches: 8, Indels: 11
0.78 0.09 0.13
Matches are distributed among these distances:
38 12 0.18
39 51 0.76
40 4 0.06
ACGTcount: A:0.37, C:0.17, G:0.01, T:0.45
Consensus pattern (39 bp):
ATTCTTAATTTCTTAAATTATTTCACATTAACATTATAA
Found at i:7475 original size:24 final size:24
Alignment explanation
Indices: 7423--7505 Score: 132
Period size: 24 Copynumber: 3.5 Consensus size: 24
7413 TTCATTTAAC
* * *
7423 GTTCGTGAACTTGTTCGTTT-AAT
1 GTTCGTGAACATATTCCTTTAAAT
7446 GTTCGTGAACATATTCCTTTAAAT
1 GTTCGTGAACATATTCCTTTAAAT
7470 GTTCGTGAACATATTCCTTTAAAT
1 GTTCGTGAACATATTCCTTTAAAT
7494 GTTCGTGAACAT
1 GTTCGTGAACAT
7506 GTTCATATAG
Statistics
Matches: 56, Mismatches: 3, Indels: 1
0.93 0.05 0.02
Matches are distributed among these distances:
23 17 0.30
24 39 0.70
ACGTcount: A:0.25, C:0.16, G:0.17, T:0.42
Consensus pattern (24 bp):
GTTCGTGAACATATTCCTTTAAAT
Found at i:7509 original size:12 final size:12
Alignment explanation
Indices: 7423--7509 Score: 54
Period size: 12 Copynumber: 7.3 Consensus size: 12
7413 TTCATTTAAC
*
7423 GTTCGTGAACTT
1 GTTCGTGAACAT
**
7435 GTTCGTTTA-AT
1 GTTCGTGAACAT
7446 GTTCGTGAACAT
1 GTTCGTGAACAT
* * *
7458 ATTCCTTTAA-AT
1 GTT-CGTGAACAT
7470 GTTCGTGAACAT
1 GTTCGTGAACAT
* * *
7482 ATTCCTTTAA-AT
1 GTT-CGTGAACAT
7494 GTTCGTGAACAT
1 GTTCGTGAACAT
7506 GTTC
1 GTTC
7510 ATATAGTGTT
Statistics
Matches: 53, Mismatches: 17, Indels: 10
0.66 0.21 0.12
Matches are distributed among these distances:
11 16 0.30
12 29 0.55
13 8 0.15
ACGTcount: A:0.24, C:0.16, G:0.17, T:0.43
Consensus pattern (12 bp):
GTTCGTGAACAT
Found at i:8118 original size:17 final size:18
Alignment explanation
Indices: 8080--8125 Score: 67
Period size: 17 Copynumber: 2.6 Consensus size: 18
8070 GTTTCTAAGG
8080 GAATTGGAATCTCTGAAT
1 GAATTGGAATCTCTGAAT
* *
8098 GAATTGGAATCTGT-CAT
1 GAATTGGAATCTCTGAAT
8115 GAATTGGAATC
1 GAATTGGAATC
8126 CAATTCCATA
Statistics
Matches: 26, Mismatches: 2, Indels: 1
0.90 0.07 0.03
Matches are distributed among these distances:
17 13 0.50
18 13 0.50
ACGTcount: A:0.33, C:0.11, G:0.24, T:0.33
Consensus pattern (18 bp):
GAATTGGAATCTCTGAAT
Found at i:8782 original size:256 final size:252
Alignment explanation
Indices: 8494--9114 Score: 790
Period size: 256 Copynumber: 2.4 Consensus size: 252
8484 CTTCATCCGA
8494 GACCCGACTCGACCAAAATAAAGTTTCACCCGACCCGACCCGAATATATGAATTAGAAACCC-AA
1 GACCCGAC-CGACCAAAATAAAGTTTCACCCGACCCGACCCGAATATATGAATTAGAAACCCGAA
* * ***
8558 CC-CCAAAAATAAAAAAATTATTTTTATTCAATAAAAACAA-TGACTTAATT-AGGGAAAA-TAT
65 CCACCAAAAATAAAAAAATTATTTTTATTCAATAAAAA-AAGAGAATTAATTGAAAAAAAATTAT
*
8619 ATATAGAGGGGTATTATTGTAATTATTCCTAAATATATAAGGTAAATTATATATATATTTTGGGT
129 ATATAGAGGGGTATTATTGTAATTATTCCTAAATATATAAGGTAAATTATATATAT-TTTCGGGT
8684 CGAGTCGAGTATTTTTCACCATAAACCCGAACCCAACCCGACCCGAATATCACATATTAAAAAAC
193 C--G--G-GTATTTTTCACCATAAACCCGAACCCAACCCGACCCGAATATCACA-ATTAAAAAAC
*
8749 T
252 C
8750 GACCCGACCGGACCAAAATAAAGTTTCACCCGACCCGACCCGAATATATGAATTAGAAATCCGAC
1 GACCCGACC-GACCAAAATAAAGTTTCACCCGACCCGACCCGAATATATGAATTAGAAA--C--C
* *
8815 TCGACCCGACCCGACCCAAAATAATACAAAATTATTTGTATTCAATAAAAAAAGAGAATTAATTG
61 -CGA----A-CC-ACCAAAAATAA-A-AAAATTATTTTTATTCAATAAAAAAAGAGAATTAATTG
8880 AAAAAAAATTATATATAGAGGGGTATTATTGTAATTATTCCTAAATATATAAGGTAAATTATATA
117 AAAAAAAATTATATATAGAGGGGTATTATTGTAATTATTCCTAAATATATAAGGTAAATTATATA
* * * *
8945 TATTTTCGGGTCGGGTATTTTTCACCCTAAACCCGAACTCGACCCGACCCGAATATCACACTTAA
182 TATTTTCGGGTCGGGTATTTTTCACCATAAACCCGAACCCAACCCGACCCGAATATCACAATTAA
9010 AAAACC
247 AAAACC
** * *
9016 GACCCTCCCGACCAAAATAAAGTTTCACCCGACCCGACCTG-A-ATATGAATTAGAAACCCGACC
1 GACCCGACCGACCAAAATAAAGTTTCACCCGACCCGACCCGAATATATGAATTAGAAACCCGAAC
9079 CGACCTGAAATAATAAAAAAA-TATTTTTATTCAATA
66 C-ACC--AAA-AATAAAAAAATTATTTTTATTCAATA
9115 TATGAATAAG
Statistics
Matches: 324, Mismatches: 19, Indels: 47
0.83 0.05 0.12
Matches are distributed among these distances:
253 20 0.06
254 4 0.01
255 4 0.01
256 62 0.19
258 4 0.01
259 1 0.00
260 1 0.00
261 2 0.01
262 1 0.00
263 14 0.04
264 1 0.00
265 31 0.10
266 17 0.05
267 45 0.14
268 1 0.00
269 9 0.03
270 4 0.01
271 31 0.10
272 13 0.04
273 59 0.18
ACGTcount: A:0.41, C:0.21, G:0.13, T:0.26
Consensus pattern (252 bp):
GACCCGACCGACCAAAATAAAGTTTCACCCGACCCGACCCGAATATATGAATTAGAAACCCGAAC
CACCAAAAATAAAAAAATTATTTTTATTCAATAAAAAAAGAGAATTAATTGAAAAAAAATTATAT
ATAGAGGGGTATTATTGTAATTATTCCTAAATATATAAGGTAAATTATATATATTTTCGGGTCGG
GTATTTTTCACCATAAACCCGAACCCAACCCGACCCGAATATCACAATTAAAAAACC
Found at i:9573 original size:28 final size:30
Alignment explanation
Indices: 9508--9636 Score: 151
Period size: 30 Copynumber: 4.4 Consensus size: 30
9498 CAGAGGATCC
* * *
9508 CATGCAAAATCAGGACGAGGAACGAGGTCT
1 CATGCAGAATCAGGACGAGGAACTAAGTCT
9538 CATGCAGAATCAGGACG-GGAACTAAG-CT
1 CATGCAGAATCAGGACGAGGAACTAAGTCT
*
9566 CATGCAGAATCAGGACGAGGAAC-AGTGTCT
1 CATGCAGAATCAGGACGAGGAACTA-AGTCT
* *
9596 CATGCAGAATCAGGACG-GGGACTAAG-CC
1 CATGCAGAATCAGGACGAGGAACTAAGTCT
*
9624 CATGCAAAATCAG
1 CATGCAGAATCAG
9637 AAATGAATCA
Statistics
Matches: 87, Mismatches: 8, Indels: 10
0.83 0.08 0.10
Matches are distributed among these distances:
28 33 0.38
29 18 0.21
30 36 0.41
ACGTcount: A:0.36, C:0.22, G:0.29, T:0.14
Consensus pattern (30 bp):
CATGCAGAATCAGGACGAGGAACTAAGTCT
Found at i:9598 original size:58 final size:58
Alignment explanation
Indices: 9506--9636 Score: 219
Period size: 58 Copynumber: 2.3 Consensus size: 58
9496 CGCAGAGGAT
9506 CCCATGCAAAATCAGGACGAGGAACGAGGTCTCATGCAGAATCAGGACGGGAACTAAG
1 CCCATGCAAAATCAGGACGAGGAACGAGGTCTCATGCAGAATCAGGACGGGAACTAAG
* * *
9564 CTCATGCAGAATCAGGACGAGGAAC-AGTGTCTCATGCAGAATCAGGACGGGGACTAAG
1 CCCATGCAAAATCAGGACGAGGAACGAG-GTCTCATGCAGAATCAGGACGGGAACTAAG
9622 CCCATGCAAAATCAG
1 CCCATGCAAAATCAG
9637 AAATGAATCA
Statistics
Matches: 67, Mismatches: 5, Indels: 2
0.91 0.07 0.03
Matches are distributed among these distances:
57 2 0.03
58 65 0.97
ACGTcount: A:0.35, C:0.23, G:0.28, T:0.14
Consensus pattern (58 bp):
CCCATGCAAAATCAGGACGAGGAACGAGGTCTCATGCAGAATCAGGACGGGAACTAAG
Found at i:11683 original size:21 final size:23
Alignment explanation
Indices: 11643--11688 Score: 69
Period size: 21 Copynumber: 2.1 Consensus size: 23
11633 AGATTCAAAA
*
11643 AGGGAAATCGATTCCCCTGCTAC
1 AGGGAAATCGATTACCCTGCTAC
11666 AGGG-AATCGA-TACCCTGCTAC
1 AGGGAAATCGATTACCCTGCTAC
11687 AG
1 AG
11689 TACTGCTACA
Statistics
Matches: 22, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
21 12 0.55
22 6 0.27
23 4 0.18
ACGTcount: A:0.28, C:0.28, G:0.24, T:0.20
Consensus pattern (23 bp):
AGGGAAATCGATTACCCTGCTAC
Found at i:12521 original size:21 final size:20
Alignment explanation
Indices: 12491--12547 Score: 78
Period size: 21 Copynumber: 2.7 Consensus size: 20
12481 CATATGAAAT
12491 TTGTCCCGAATGACCACTGTA
1 TTGT-CCGAATGACCACTGTA
*
12512 TTGTCTCGAAGGACCACTGTA
1 TTGTC-CGAATGACCACTGTA
12533 TTGTCCTGAATGACC
1 TTGTCC-GAATGACC
12548 TATGAAACCC
Statistics
Matches: 32, Mismatches: 2, Indels: 4
0.84 0.05 0.11
Matches are distributed among these distances:
20 2 0.06
21 30 0.94
ACGTcount: A:0.23, C:0.26, G:0.21, T:0.30
Consensus pattern (20 bp):
TTGTCCGAATGACCACTGTA
Found at i:12641 original size:18 final size:17
Alignment explanation
Indices: 12614--12647 Score: 50
Period size: 18 Copynumber: 1.9 Consensus size: 17
12604 ACATGGGCAT
*
12614 TATCATTTGTTCATTTCA
1 TATCACTTGTTC-TTTCA
12632 TATCACTTGTTCTTTC
1 TATCACTTGTTCTTTC
12648 TCTTCTGTCA
Statistics
Matches: 15, Mismatches: 1, Indels: 1
0.88 0.06 0.06
Matches are distributed among these distances:
17 4 0.27
18 11 0.73
ACGTcount: A:0.18, C:0.21, G:0.06, T:0.56
Consensus pattern (17 bp):
TATCACTTGTTCTTTCA
Found at i:12824 original size:2 final size:2
Alignment explanation
Indices: 12817--12844 Score: 56
Period size: 2 Copynumber: 14.0 Consensus size: 2
12807 ACATATGTTC
12817 AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT
12845 CACATATACT
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 26 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:14585 original size:102 final size:104
Alignment explanation
Indices: 14407--14607 Score: 289
Period size: 102 Copynumber: 2.0 Consensus size: 104
14397 AAGTATGATG
* *** * * *
14407 GTTATCGATCGATTTTGTTTAATGCATTTGTTGCATTTTTGTATCAGTATTTTTGTGTACTTTTG
1 GTTATCGATCGATTTTGTTTAATGCATTTGTTGCATTTTCGTATCAGTACCATTGTCTAATTTCG
* * *
14472 GTACTATATGTGCATTGATGGTGTTCATAATGAGCACTT
66 GCACTATATGTGCATTCATGGTATTCATAATGAGCACTT
*
14511 GTTATCGATCGA-TTT-TTTAATGCATTTGTTGTATTTTCGTATCAGTACCATTGTCTAATTTCG
1 GTTATCGATCGATTTTGTTTAATGCATTTGTTGCATTTTCGTATCAGTACCATTGTCTAATTTCG
14574 GCACTATATGTGCATTCATGGTATTCATAATGAG
66 GCACTATATGTGCATTCATGGTATTCATAATGAG
14608 TTTGTGCATT
Statistics
Matches: 86, Mismatches: 11, Indels: 2
0.87 0.11 0.02
Matches are distributed among these distances:
102 71 0.83
103 3 0.03
104 12 0.14
ACGTcount: A:0.22, C:0.12, G:0.19, T:0.47
Consensus pattern (104 bp):
GTTATCGATCGATTTTGTTTAATGCATTTGTTGCATTTTCGTATCAGTACCATTGTCTAATTTCG
GCACTATATGTGCATTCATGGTATTCATAATGAGCACTT
Found at i:24451 original size:10 final size:10
Alignment explanation
Indices: 24424--24461 Score: 51
Period size: 11 Copynumber: 3.7 Consensus size: 10
24414 AAGGAAGTGT
24424 GGAG-GAAAA
1 GGAGAGAAAA
24433 GGAAGAGAAAA
1 GG-AGAGAAAA
24444 GGAGAGAAAA
1 GGAGAGAAAA
24454 GGGAGAGA
1 -GGAGAGA
24462 GGGAAAGGGG
Statistics
Matches: 26, Mismatches: 0, Indels: 4
0.87 0.00 0.13
Matches are distributed among these distances:
9 2 0.08
10 10 0.38
11 14 0.54
ACGTcount: A:0.55, C:0.00, G:0.45, T:0.00
Consensus pattern (10 bp):
GGAGAGAAAA
Found at i:24753 original size:2 final size:2
Alignment explanation
Indices: 24741--24773 Score: 59
Period size: 2 Copynumber: 17.0 Consensus size: 2
24731 TTAAAGTATC
24741 AT AT A- AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
24774 TAATTTTAAA
Statistics
Matches: 30, Mismatches: 0, Indels: 2
0.94 0.00 0.06
Matches are distributed among these distances:
1 1 0.03
2 29 0.97
ACGTcount: A:0.52, C:0.00, G:0.00, T:0.48
Consensus pattern (2 bp):
AT
Found at i:24799 original size:29 final size:30
Alignment explanation
Indices: 24762--24829 Score: 77
Period size: 29 Copynumber: 2.3 Consensus size: 30
24752 ATATATATAT
* *
24762 ATATATATATATTAATTTTAAAA-AAATTTA
1 ATAT-TATATATAAATTTAAAAATAAATTTA
*
24792 ATATTATAAATAAATTTAAAAATAAATTTA
1 ATATTATATATAAATTTAAAAATAAATTTA
*
24822 CTA-TATAT
1 ATATTATAT
24830 TATATGTCAC
Statistics
Matches: 32, Mismatches: 5, Indels: 3
0.80 0.12 0.08
Matches are distributed among these distances:
29 19 0.59
30 13 0.41
ACGTcount: A:0.54, C:0.01, G:0.00, T:0.44
Consensus pattern (30 bp):
ATATTATATATAAATTTAAAAATAAATTTA
Found at i:27161 original size:36 final size:36
Alignment explanation
Indices: 27114--27186 Score: 146
Period size: 36 Copynumber: 2.0 Consensus size: 36
27104 CATTGATGTC
27114 TCCCTCTGCCATTTTCAATTTATCCACTGTAAGATT
1 TCCCTCTGCCATTTTCAATTTATCCACTGTAAGATT
27150 TCCCTCTGCCATTTTCAATTTATCCACTGTAAGATT
1 TCCCTCTGCCATTTTCAATTTATCCACTGTAAGATT
27186 T
1 T
27187 TTTATTTGAA
Statistics
Matches: 37, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
36 37 1.00
ACGTcount: A:0.22, C:0.27, G:0.08, T:0.42
Consensus pattern (36 bp):
TCCCTCTGCCATTTTCAATTTATCCACTGTAAGATT
Found at i:27548 original size:3 final size:3
Alignment explanation
Indices: 27540--27609 Score: 99
Period size: 3 Copynumber: 23.7 Consensus size: 3
27530 CTACCAAAAA
* *
27540 TAT TAT TA- TAT TAT AAA TAT TAAT TAT T-T TAT TAT TAT TAT TAT
1 TAT TAT TAT TAT TAT TAT TAT T-AT TAT TAT TAT TAT TAT TAT TAT
27584 TAT TAT TAT TAT TAT TAT TAT TAT TA
1 TAT TAT TAT TAT TAT TAT TAT TAT TA
27610 ATTAATGTAC
Statistics
Matches: 60, Mismatches: 4, Indels: 6
0.86 0.06 0.09
Matches are distributed among these distances:
2 4 0.07
3 53 0.88
4 3 0.05
ACGTcount: A:0.37, C:0.00, G:0.00, T:0.63
Consensus pattern (3 bp):
TAT
Found at i:29144 original size:30 final size:31
Alignment explanation
Indices: 29068--29152 Score: 95
Period size: 30 Copynumber: 2.7 Consensus size: 31
29058 GGTTCTGATT
* *
29068 TATTTTTATTTATTGTTTAGTCCTTTAACTTTC
1 TATTTTTAGTTA-T-TTTAGTCTTTTAACTTTC
*
29101 TA-TTTTAGCTATTTTAGTCTTTTAACTTTC
1 TATTTTTAGTTATTTTAGTCTTTTAACTTTC
29131 TATTTTTA-TTA-TTTAGTTCTTT
1 TATTTTTAGTTATTTTAG-TCTTT
29153 AATTTACTAA
Statistics
Matches: 46, Mismatches: 4, Indels: 7
0.81 0.07 0.12
Matches are distributed among these distances:
29 5 0.11
30 26 0.57
31 6 0.13
32 7 0.15
33 2 0.04
ACGTcount: A:0.19, C:0.11, G:0.06, T:0.65
Consensus pattern (31 bp):
TATTTTTAGTTATTTTAGTCTTTTAACTTTC
Found at i:37233 original size:32 final size:32
Alignment explanation
Indices: 37187--37253 Score: 89
Period size: 32 Copynumber: 2.1 Consensus size: 32
37177 TTACCCGACT
* *
37187 TGTTTTCAACCTGACTTGTTTTCAACCTGACA
1 TGTTTTCAACCTGACCTGTTTTCAACATGACA
* * *
37219 TGTTTTTAATCTGACCTGTTTTTAACATGACA
1 TGTTTTCAACCTGACCTGTTTTCAACATGACA
37251 TGT
1 TGT
37254 AAATGATCCG
Statistics
Matches: 30, Mismatches: 5, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
32 30 1.00
ACGTcount: A:0.22, C:0.19, G:0.13, T:0.45
Consensus pattern (32 bp):
TGTTTTCAACCTGACCTGTTTTCAACATGACA
Found at i:37241 original size:16 final size:16
Alignment explanation
Indices: 37187--37253 Score: 80
Period size: 16 Copynumber: 4.2 Consensus size: 16
37177 TTACCCGACT
*
37187 TGTTTTCAACCTGACT
1 TGTTTTCAACCTGACA
37203 TGTTTTCAACCTGACA
1 TGTTTTCAACCTGACA
* * *
37219 TGTTTTTAATCTGACC
1 TGTTTTCAACCTGACA
* *
37235 TGTTTTTAACATGACA
1 TGTTTTCAACCTGACA
37251 TGT
1 TGT
37254 AAATGATCCG
Statistics
Matches: 44, Mismatches: 7, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
16 44 1.00
ACGTcount: A:0.22, C:0.19, G:0.13, T:0.45
Consensus pattern (16 bp):
TGTTTTCAACCTGACA
Found at i:37460 original size:22 final size:25
Alignment explanation
Indices: 37430--37487 Score: 86
Period size: 22 Copynumber: 2.4 Consensus size: 25
37420 AAATAGACCT
*
37430 ATTATATAAAATTATTT-AAT-AAA
1 ATTAGATAAAATTATTTAAATGAAA
37453 ATTA-ATAAAATTATTTAAATGAAA
1 ATTAGATAAAATTATTTAAATGAAA
37477 ATTAGATAAAA
1 ATTAGATAAAA
37488 CATTATTAAT
Statistics
Matches: 32, Mismatches: 0, Indels: 4
0.89 0.00 0.11
Matches are distributed among these distances:
22 12 0.38
23 7 0.22
24 7 0.22
25 6 0.19
ACGTcount: A:0.59, C:0.00, G:0.03, T:0.38
Consensus pattern (25 bp):
ATTAGATAAAATTATTTAAATGAAA
Found at i:37533 original size:14 final size:14
Alignment explanation
Indices: 37511--37557 Score: 50
Period size: 14 Copynumber: 3.7 Consensus size: 14
37501 GCAAAAGGAA
*
37511 AATTAATATAGTTT
1 AATTTATATAGTTT
37525 AATTTATATA----
1 AATTTATATAGTTT
37535 AA-TTATATAGTTT
1 AATTTATATAGTTT
37548 AATTTATATA
1 AATTTATATA
37558 AAGAAAAATA
Statistics
Matches: 27, Mismatches: 1, Indels: 10
0.71 0.03 0.26
Matches are distributed among these distances:
9 7 0.26
10 2 0.07
13 2 0.07
14 16 0.59
ACGTcount: A:0.45, C:0.00, G:0.04, T:0.51
Consensus pattern (14 bp):
AATTTATATAGTTT
Found at i:37544 original size:23 final size:24
Alignment explanation
Indices: 37510--37559 Score: 93
Period size: 23 Copynumber: 2.1 Consensus size: 24
37500 TGCAAAAGGA
37510 AAATTAATATAGTTTAATTTATAT
1 AAATTAATATAGTTTAATTTATAT
37534 AAATT-ATATAGTTTAATTTATAT
1 AAATTAATATAGTTTAATTTATAT
37557 AAA
1 AAA
37560 GAAAAATAAT
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
23 21 0.81
24 5 0.19
ACGTcount: A:0.48, C:0.00, G:0.04, T:0.48
Consensus pattern (24 bp):
AAATTAATATAGTTTAATTTATAT
Found at i:40932 original size:31 final size:28
Alignment explanation
Indices: 40854--40997 Score: 119
Period size: 31 Copynumber: 4.7 Consensus size: 28
40844 AAATGGTATT
* *
40854 TATAATTAATATTAAAATAATTATATAT
1 TATAATTAATATTAATATAATTATATAA
*
40882 TATAATTAATACTAATATAATTAATATTAA
1 TATAATTAATATTAATATAATT-ATA-TAA
40912 TATTAACTT-ATATTAATATAATATAGTTTATAA
1 TA-TAA-TTAATATTAATATAAT-TA---TATAA
*
40945 TTTATAATTAATATTAATATAAAATATAGTATA
1 --TATAATTAATATTAATAT-AATTATA-TA-A
*
40978 TAAAATTAATATTAATATAA
1 TATAATTAATATTAATATAA
40998 ACTATATGTT
Statistics
Matches: 96, Mismatches: 6, Indels: 26
0.75 0.05 0.20
Matches are distributed among these distances:
28 20 0.21
29 3 0.03
30 6 0.06
31 35 0.36
32 5 0.05
33 6 0.06
34 17 0.18
35 4 0.04
ACGTcount: A:0.52, C:0.01, G:0.01, T:0.45
Consensus pattern (28 bp):
TATAATTAATATTAATATAATTATATAA
Found at i:40998 original size:31 final size:30
Alignment explanation
Indices: 40946--41019 Score: 100
Period size: 31 Copynumber: 2.5 Consensus size: 30
40936 AGTTTATAAT
40946 TTAT-AATTAATATTAATATAAAATATA-G
1 TTATAAATTAATATTAATATAAAATATATG
*
40974 TATATAAAATTAATATTAATATAAACTATATG
1 T-TAT-AAATTAATATTAATATAAAATATATG
41006 TTATAAATT-ATATT
1 TTATAAATTAATATT
41020 GTATAGTTTA
Statistics
Matches: 41, Mismatches: 1, Indels: 7
0.84 0.02 0.14
Matches are distributed among these distances:
28 1 0.02
29 8 0.20
30 5 0.12
31 25 0.61
32 2 0.05
ACGTcount: A:0.51, C:0.01, G:0.03, T:0.45
Consensus pattern (30 bp):
TTATAAATTAATATTAATATAAAATATATG
Found at i:41030 original size:81 final size:84
Alignment explanation
Indices: 40898--41092 Score: 201
Period size: 88 Copynumber: 2.3 Consensus size: 84
40888 TAATACTAAT
*
40898 ATAATTAATATTAATATTAACTTATATTAATATAATATAGTTTATAATTTAT-A-AT-TA-ATAT
1 ATAATTAATATTAATATAAAC-TATATTAATATAATATAGTTTATAATTTATAACATATACATAT
40959 TAATATAAAAT-ATAGTATATA-
65 TAATAT-AAATCATAGT-TA-AG
* *
40980 A-AATTAATATTAATATAAACTATATGTTATA-AATTATA-TTGTATAGTTTATAAACTATATAC
1 ATAATTAATATTAATATAAACTATAT-TAATATAA-TATAGTT-TATAATTTAT-AAC-ATATAC
41042 TATATTAATATAAATCATAGTTAAG
61 -ATATTAATATAAATCATAGTTAAG
*
41067 ATAATTAACATTAATATAAACTATAT
1 ATAATTAATATTAATATAAACTATAT
41093 AGTACATTAA
Statistics
Matches: 96, Mismatches: 4, Indels: 20
0.80 0.03 0.17
Matches are distributed among these distances:
80 9 0.09
81 35 0.36
82 1 0.01
83 1 0.01
85 2 0.02
86 3 0.03
87 7 0.07
88 38 0.40
ACGTcount: A:0.49, C:0.04, G:0.04, T:0.44
Consensus pattern (84 bp):
ATAATTAATATTAATATAAACTATATTAATATAATATAGTTTATAATTTATAACATATACATATT
AATATAAATCATAGTTAAG
Found at i:41045 original size:21 final size:21
Alignment explanation
Indices: 40993--41046 Score: 56
Period size: 21 Copynumber: 2.6 Consensus size: 21
40983 TTAATATTAA
* *
40993 TATAAACTATATGTTATAAAT
1 TATATACTATATGTTATAAAC
**
41014 TATATTGTATA-GTTTATAAAC
1 TATATACTATATG-TTATAAAC
41035 TATATACTATAT
1 TATATACTATAT
41047 TAATATAAAT
Statistics
Matches: 25, Mismatches: 6, Indels: 3
0.74 0.18 0.09
Matches are distributed among these distances:
20 1 0.04
21 24 0.96
ACGTcount: A:0.43, C:0.06, G:0.06, T:0.46
Consensus pattern (21 bp):
TATATACTATATGTTATAAAC
Found at i:41115 original size:20 final size:21
Alignment explanation
Indices: 41074--41173 Score: 71
Period size: 22 Copynumber: 4.7 Consensus size: 21
41064 AAGATAATTA
41074 ACATTAATATAAACTATATAGT
1 ACATTAATATAAAC-ATATAGT
41096 ACATTAATATAAAC-TATAGT
1 ACATTAATATAAACATATAGT
** * *
41116 TTATAAATTATATACA-ATAGGT
1 ACATTAA-TATAAACATATA-GT
* *
41138 -TATAAAGTATAAACTATATAGT
1 ACATTAA-TATAAAC-ATATAGT
*
41160 ACACTAATATAAAC
1 ACATTAATATAAAC
41174 TATTGCTTAT
Statistics
Matches: 63, Mismatches: 9, Indels: 12
0.75 0.11 0.14
Matches are distributed among these distances:
20 10 0.16
21 21 0.33
22 26 0.41
23 6 0.10
ACGTcount: A:0.50, C:0.09, G:0.06, T:0.35
Consensus pattern (21 bp):
ACATTAATATAAACATATAGT
Found at i:41241 original size:24 final size:24
Alignment explanation
Indices: 41214--41262 Score: 62
Period size: 24 Copynumber: 2.0 Consensus size: 24
41204 AGTTTAAATA
*
41214 ACATATAAAATAGATTGTATATAT
1 ACATATAAAATAGATTATATATAT
** *
41238 ACATATATTATAGGTTATATATAT
1 ACATATAAAATAGATTATATATAT
41262 A
1 A
41263 GTTTATATAT
Statistics
Matches: 21, Mismatches: 4, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
24 21 1.00
ACGTcount: A:0.47, C:0.04, G:0.08, T:0.41
Consensus pattern (24 bp):
ACATATAAAATAGATTATATATAT
Found at i:41540 original size:13 final size:13
Alignment explanation
Indices: 41485--41531 Score: 67
Period size: 13 Copynumber: 3.5 Consensus size: 13
41475 AATTATAATT
41485 TATATAGTTTATACA
1 TATATAGTTTAT--A
41500 TATATAGTTTATA
1 TATATAGTTTATA
*
41513 TACATAGTTTATA
1 TATATAGTTTATA
41526 TATATA
1 TATATA
41532 CTTCATATAA
Statistics
Matches: 30, Mismatches: 2, Indels: 2
0.88 0.06 0.06
Matches are distributed among these distances:
13 18 0.60
15 12 0.40
ACGTcount: A:0.40, C:0.04, G:0.06, T:0.49
Consensus pattern (13 bp):
TATATAGTTTATA
Found at i:41540 original size:28 final size:26
Alignment explanation
Indices: 41488--41557 Score: 68
Period size: 28 Copynumber: 2.5 Consensus size: 26
41478 TATAATTTAT
* *
41488 ATAGTTTATACATATATAGTTTATATAC
1 ATAGTTTAT--ATATATACTTTATAAAC
41516 ATAGTTTATATATATACTTCATATAAAC
1 ATAGTTTATATATATACTT--TATAAAC
* *
41544 ATAATATATATATA
1 ATAGTTTATATATA
41558 GCTTATAATA
Statistics
Matches: 36, Mismatches: 4, Indels: 4
0.82 0.09 0.09
Matches are distributed among these distances:
26 9 0.25
28 27 0.75
ACGTcount: A:0.44, C:0.07, G:0.04, T:0.44
Consensus pattern (26 bp):
ATAGTTTATATATATACTTTATAAAC
Found at i:41567 original size:18 final size:17
Alignment explanation
Indices: 41544--41601 Score: 71
Period size: 18 Copynumber: 3.2 Consensus size: 17
41534 TCATATAAAC
*
41544 ATAATATATATATAGCTT
1 ATAATA-ATATATAGTTT
41562 ATAATAATTATATAGTTT
1 ATAATAA-TATATAGTTT
*
41580 ATAATACAAATATAGTTT
1 ATAATA-ATATATAGTTT
41598 ATAA
1 ATAA
41602 ATAAACTTAT
Statistics
Matches: 36, Mismatches: 2, Indels: 4
0.86 0.05 0.10
Matches are distributed among these distances:
17 1 0.03
18 34 0.94
19 1 0.03
ACGTcount: A:0.48, C:0.03, G:0.05, T:0.43
Consensus pattern (17 bp):
ATAATAATATATAGTTT
Found at i:41708 original size:24 final size:24
Alignment explanation
Indices: 41676--41723 Score: 71
Period size: 24 Copynumber: 2.0 Consensus size: 24
41666 AAATATAGTG
41676 TATATAGTTCACTA-ATAAACTATA
1 TATATAGTTCA-TATATAAACTATA
*
41700 TATATAGTTCATATGTAAACTATA
1 TATATAGTTCATATATAAACTATA
41724 GTTCATATGT
Statistics
Matches: 22, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
23 2 0.09
24 20 0.91
ACGTcount: A:0.44, C:0.10, G:0.06, T:0.40
Consensus pattern (24 bp):
TATATAGTTCATATATAAACTATA
Found at i:41725 original size:18 final size:18
Alignment explanation
Indices: 41702--41736 Score: 70
Period size: 18 Copynumber: 1.9 Consensus size: 18
41692 AAACTATATA
41702 TATAGTTCATATGTAAAC
1 TATAGTTCATATGTAAAC
41720 TATAGTTCATATGTAAA
1 TATAGTTCATATGTAAA
41737 TTACATAGGC
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
18 17 1.00
ACGTcount: A:0.40, C:0.09, G:0.11, T:0.40
Consensus pattern (18 bp):
TATAGTTCATATGTAAAC
Found at i:42603 original size:12 final size:12
Alignment explanation
Indices: 42588--42647 Score: 68
Period size: 12 Copynumber: 5.0 Consensus size: 12
42578 GAAATAAAAA
42588 CAGAATTCAGAT
1 CAGAATTCAGAT
*
42600 CAG-ATATCAGAA
1 CAGAAT-TCAGAT
*
42612 CAGAATCCAGAT
1 CAGAATTCAGAT
* *
42624 CAGAAATCAGAA
1 CAGAATTCAGAT
42636 CAGAATTCAGAT
1 CAGAATTCAGAT
42648 AATGTATCAG
Statistics
Matches: 38, Mismatches: 8, Indels: 4
0.76 0.16 0.08
Matches are distributed among these distances:
11 2 0.05
12 34 0.89
13 2 0.05
ACGTcount: A:0.47, C:0.18, G:0.17, T:0.18
Consensus pattern (12 bp):
CAGAATTCAGAT
Found at i:42678 original size:48 final size:48
Alignment explanation
Indices: 42574--42682 Score: 141
Period size: 48 Copynumber: 2.3 Consensus size: 48
42564 AAACAGAGAT
* * * *
42574 ATCAGAAATAAAAACAGAATTCAGATCAGATATCAGAACAGAATCCAG
1 ATCAGAAATCAGAACAGAATTCAGATAAGATATCAGAACAGAATCAAG
42622 ATCAGAAATCAGAACAGAATTCAGATAATG-TATCAGAACAGAATTCAAG
1 ATCAGAAATCAGAACAGAATTCAGATAA-GATATCAGAACAGAA-TCAAG
*
42671 -TCGGAAATCAGA
1 ATCAGAAATCAGA
42683 TAAAATATTT
Statistics
Matches: 54, Mismatches: 5, Indels: 4
0.86 0.08 0.06
Matches are distributed among these distances:
48 49 0.91
49 5 0.09
ACGTcount: A:0.50, C:0.16, G:0.17, T:0.18
Consensus pattern (48 bp):
ATCAGAAATCAGAACAGAATTCAGATAAGATATCAGAACAGAATCAAG
Found at i:42680 original size:24 final size:24
Alignment explanation
Indices: 42574--42682 Score: 123
Period size: 24 Copynumber: 4.5 Consensus size: 24
42564 AAACAGAGAT
* *
42574 ATCAGAAATAAAAACAGAATTCAG
1 ATCAGAAATCAGAACAGAATTCAG
* *
42598 ATCAGATATCAGAACAGAATCCAG
1 ATCAGAAATCAGAACAGAATTCAG
42622 ATCAGAAATCAGAACAGAATTCAG
1 ATCAGAAATCAGAACAGAATTCAG
* *
42646 ATAATG-TATCAGAACAGAATTCA-
1 ATCA-GAAATCAGAACAGAATTCAG
*
42669 AGTCGGAAATCAGA
1 A-TCAGAAATCAGA
42683 TAAAATATTT
Statistics
Matches: 71, Mismatches: 11, Indels: 6
0.81 0.12 0.07
Matches are distributed among these distances:
23 2 0.03
24 68 0.96
25 1 0.01
ACGTcount: A:0.50, C:0.16, G:0.17, T:0.18
Consensus pattern (24 bp):
ATCAGAAATCAGAACAGAATTCAG
Found at i:46012 original size:2 final size:2
Alignment explanation
Indices: 45999--46032 Score: 50
Period size: 2 Copynumber: 16.0 Consensus size: 2
45989 TAATTTACTT
45999 TA TA TGA TA TA TA TA TA TA TA TA TA TA TA CTA TA
1 TA TA T-A TA TA TA TA TA TA TA TA TA TA TA -TA TA
46033 CATAGTTTAT
Statistics
Matches: 30, Mismatches: 0, Indels: 4
0.88 0.00 0.12
Matches are distributed among these distances:
2 26 0.87
3 4 0.13
ACGTcount: A:0.47, C:0.03, G:0.03, T:0.47
Consensus pattern (2 bp):
TA
Found at i:46084 original size:18 final size:18
Alignment explanation
Indices: 46061--46173 Score: 64
Period size: 18 Copynumber: 5.6 Consensus size: 18
46051 GTATTATAAG
46061 TTACATGTATAGTTTACA
1 TTACATGTATAGTTTACA
* *
46079 TTACATGTATACATATACTATGA
1 TTACATGTATA-GT-T--TA-CA
*
46102 GTTACATATATAGTTTACA
1 -TTACATGTATAGTTTACA
* *
46121 TTACATGTATACATATACTATAA
1 TTACATGTATA-GT-T--TA-CA
*
46144 GTTACATATATAGTTTACA
1 -TTACATGTATAGTTTACA
46163 TTACATGTATA
1 TTACATGTATA
46174 CACATACAAT
Statistics
Matches: 71, Mismatches: 12, Indels: 24
0.66 0.11 0.22
Matches are distributed among these distances:
18 31 0.44
19 4 0.06
20 6 0.08
22 6 0.08
23 4 0.06
24 20 0.28
ACGTcount: A:0.38, C:0.12, G:0.09, T:0.42
Consensus pattern (18 bp):
TTACATGTATAGTTTACA
Found at i:46092 original size:42 final size:42
Alignment explanation
Indices: 46045--46196 Score: 250
Period size: 42 Copynumber: 3.6 Consensus size: 42
46035 TAGTTTATAC
* * *
46045 ATACATGTATTATAAGTTACATGTATAGTTTACATTACATGT
1 ATACATATACTATAAGTTACATATATAGTTTACATTACATGT
*
46087 ATACATATACTATGAGTTACATATATAGTTTACATTACATGT
1 ATACATATACTATAAGTTACATATATAGTTTACATTACATGT
46129 ATACATATACTATAAGTTACATATATAGTTTACATTACATGT
1 ATACATATACTATAAGTTACATATATAGTTTACATTACATGT
* *
46171 ATACACATACAATAAGTTACATATAT
1 ATACATATACTATAAGTTACATATAT
46197 TAATTATTGT
Statistics
Matches: 103, Mismatches: 7, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
42 103 1.00
ACGTcount: A:0.40, C:0.12, G:0.09, T:0.39
Consensus pattern (42 bp):
ATACATATACTATAAGTTACATATATAGTTTACATTACATGT
Found at i:46106 original size:24 final size:24
Alignment explanation
Indices: 46079--46155 Score: 67
Period size: 24 Copynumber: 3.5 Consensus size: 24
46069 ATAGTTTACA
* *
46079 TTACATGTATACATATACTATGAG
1 TTACATATATACATATACTATAAG
* *
46103 TTACATATATA-GT-T--TA-CA-
1 TTACATATATACATATACTATAAG
*
46121 TTACATGTATACATATACTATAAG
1 TTACATATATACATATACTATAAG
46145 TTACATATATA
1 TTACATATATA
46156 GTTTACATTA
Statistics
Matches: 40, Mismatches: 7, Indels: 12
0.68 0.12 0.20
Matches are distributed among these distances:
18 10 0.25
19 2 0.05
20 3 0.08
22 3 0.08
23 2 0.05
24 20 0.50
ACGTcount: A:0.40, C:0.12, G:0.08, T:0.40
Consensus pattern (24 bp):
TTACATATATACATATACTATAAG
Found at i:46109 original size:16 final size:15
Alignment explanation
Indices: 46088--46153 Score: 52
Period size: 16 Copynumber: 4.5 Consensus size: 15
46078 ATTACATGTA
46088 TACATATACTATGAGT
1 TACATATACTATG-GT
*
46104 TACATATA-TA-GTT
1 TACATATACTATGGT
46117 TACAT-TAC-AT-GT
1 TACATATACTATGGT
*
46129 ATACATATACTATAAGT
1 -TACATATACTAT-GGT
46146 TACATATA
1 TACATATA
46154 TAGTTTACAT
Statistics
Matches: 41, Mismatches: 2, Indels: 14
0.72 0.04 0.25
Matches are distributed among these distances:
12 4 0.10
13 11 0.27
14 4 0.10
15 4 0.10
16 16 0.39
17 2 0.05
ACGTcount: A:0.41, C:0.12, G:0.08, T:0.39
Consensus pattern (15 bp):
TACATATACTATGGT
Found at i:46443 original size:24 final size:26
Alignment explanation
Indices: 46390--46438 Score: 66
Period size: 24 Copynumber: 1.9 Consensus size: 26
46380 ATATATATTC
*
46390 TATATATTACTTATATTAGTTAAACA
1 TATATATTACTTATATTAATTAAACA
46416 TATATA-TAC-TATATTAATATAAA
1 TATATATTACTTATATTAAT-TAAA
46439 TTATAACATA
Statistics
Matches: 21, Mismatches: 1, Indels: 3
0.84 0.04 0.12
Matches are distributed among these distances:
24 8 0.38
25 7 0.33
26 6 0.29
ACGTcount: A:0.47, C:0.06, G:0.02, T:0.45
Consensus pattern (26 bp):
TATATATTACTTATATTAATTAAACA
Found at i:46482 original size:4 final size:4
Alignment explanation
Indices: 46473--53403 Score: 10530
Period size: 4 Copynumber: 1752.0 Consensus size: 4
46463 TATATAGTTT
46473 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
46521 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC AT-- ATAT
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
46567 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
46615 ATAC ACAC ATAC ATAC ACAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
46663 ATAC ATAC ATAC ATAC ATAC ATAC ATAC --AC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
46709 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC --AC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
46755 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
46803 ATAC ATAC ATAC ATAC ATAC ATGC ATAC ATAC ATAC ATAC ATGC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * *
46851 ATAC ATAC ATAC ATGC ATAC ATGC ATAC ATGC ATGC ATGC ATGCAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC AT--AC ATAC
*
46901 ATAC ATAC ATAC ATAC ATAC ATAC ACAC ATAC --AC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
46947 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
46995 --AC ATAC ATAC ATAC ATAC ATAC ATAC AT-C ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
47040 --AC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC AT-- ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
47084 ATAC ATAC --AC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
47130 ATAC ATAC ATAC ATAC ATAC ACAC ATAC ACAC ATAC ATAC ATAC --AC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * *
47176 ACAC ATAC ACAC ATAC ATAC ACAC ACAC ATAC ACAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * * *
47224 ATAC ATAC ACAC ACAC ATAC ACAC ATAA ATAC ACAC ACAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
47272 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
47320 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * *
47368 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATGC ATGC ATGC ATGC ATGC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
47416 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
47464 ATAC ATAC ATAC ATAC ATAC --AC ATAT ATAC ATAC ATAC ATAT ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
** * * * *
47510 ATAC ATAC ACGC ATAC ACAC ATCC ACAC ATAC ATAT ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
47558 ATAT ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAT ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * *
47606 ATAC ATAC AAAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ACAC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * *
47654 ATAC ATAC ATAC ACAC ACAC ATAC ATAC ATAC ACAA ACAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
47702 ATAC --AC ATAC ACAC ATAC ATAC ATAC ACAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
47748 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ACAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * *
47796 ACAC ATAC ACAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ACAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * * *
47844 ACAT ATAC ATAC ACAC ACAC ATAC ACAT ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
47892 ATAC ATAC ATAC ATAC AT-- ATAT ATAC ATAC ATAC ATAT ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * * *
47938 ATAC ATAC ATAC ACAC ATAC ATAC --AC ACAC ACAC ACAC ACAC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * * *
47984 ATAC ATAC ACAC ACAC ATAC ACAC ATAC ATAC ACAC ACAC ATAC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * *
48032 ATAC ATAC ACAC ACAC ATAC ACAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
48080 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ACAC ACAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
48128 ATAC ATAC ATAC ATAC ATAC ACAC ATAC ATAC ATAC ATAC ACAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
48176 ATAT ATAC ATAC ACAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
48224 ATAC ATAT ATAT ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * *
48272 ATAC ATAC ATAC ATAC ATAC ACAC ACAC ATAC ATAC ATAC --AC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * * *
48318 ATAC ACAC ATAC ATAC --AC ACAC ATAC ACAC ATAC ATAC ACAC ACAAA
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC A-TAC
*
48365 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC --AC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * * *
48411 ACAC ATAC ATAC ATAC ACAC ACAC ATAC ACAC ATAC ATAC ACAC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * * *
48459 ATAC ACAC ATAC ATAC ACAC ACAC ACAC ACAC ATAC ATAC ATAC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * * *
48507 ACAC ATAC ACAC ATAC ATAC ACAC ACAC ATAC ACAC ATAC ATAC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
48555 ACAC ATAC ACAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * *
48603 ATAC ATAC ATAC ATAC ATAC AT-C ATAC AT-- ATAT ATAT ATAT ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * *
48648 ATAC ATAC ATAC ATAT ATAC ATAC ATAT ATAC ATAC ATAT ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
48696 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
48744 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC --AC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
48790 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
48838 AT-- ATAT ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
48884 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
48932 ATAC ATAC ATAC ATAC ATAC ATAC ACAC ATAC ATAC ACAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * *
48980 ATAC ACAC ATAC ATAC ATAC --AC ACAC ACAC ATAC ATAT ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
49026 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
49074 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
49122 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATGC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * *
49170 --AC ATAC ATAC ATAC ATAC ACAC ATAC ATAC ATAC ACAC ATAC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * *
49216 ATAC ACAC ACAC ATAC ACAT ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
49264 ATAC ATAC --AC ATAC ATAC ATAC ATAC ATAC ATAC -TAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
49309 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
49357 AGAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
49405 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ACAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * * *
49453 ACAC ATAC ATAC ATAC ACAC ACAC ACAC ATAC ATAT ATAC ATGC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
49501 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
49549 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
49597 ATAC ATAC ATAC ATAT ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * *
49645 ATAC ATAC ATAC ATGC ATAC ATGC ATAC AAAC ATAC ATGC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * *
49693 ATAC ACAC ATAC ATAC ATAC ACAC ATAC ACAC ATAC ATAC ACAC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * *
49741 ATAC ACAT ATAC ATAC ATAT ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * *
49789 ATAC ATAC ATAC ATAC ACAC ATAC ATAC ACAC ATAC AAAC ATAC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * *
49837 ATAC ATAC ATAC ACAC ACAC ACAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
49885 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
49933 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * *
49981 ACAC ATAC ATAC ATAC ACAC ATAC ACAC ATAC ATAC ACAC ACAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * *
50029 ACAT ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ACAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
50077 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
50125 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
50173 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ACAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * *
50221 ATAC ATAC ACAC ATAC ATAC ATAC ACAC ACAC ACAC ATAC ATAT ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
50269 ATGC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
50317 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
50365 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
50413 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATGC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * *
50461 ATAC AAAC ATAC ATGC ATAC ATAC ATAC ACAC ATAC ATAC ATAC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * *
50509 ATAC ACAC ATAC ATAC --AC ACAC ATAC ACAT ATAC ATAC ATAT ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
50555 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * *
50603 ATAC ATAC ACAC ATAC AAAC ATAC ACAC ATAC ATAC ATAC ACAC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
50651 ACAC ATAC ATAT ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
50699 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
50747 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
50795 ATAC ATAC ATGC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * *
50843 ACAC ATAT ATAC ATAC ATAC ACAC ATAC ATAC ATAC ACAC ATAC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * *
50891 ATAC ATAC ACAC ACAC ATAC ACAT ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
50939 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * *
50987 ATAC ATAC ATAC ACAC ATAC ATAC ATAC ACAC ACAC ACAC ATAC ATAT
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
51035 ATAC ATAC ATAT ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
51083 ATAC -TAC ATAC ATAC -TAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
51129 ATAC ATAC ATAC ATAC ATAC AT-- ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
51175 ATAC ATAC ATAC ATAC ATAC ATAC AAAC ATAC ATAC --AC ATAC ATGC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * *
51221 ATAC AAAC ATAC ATGC ATAC ATAC ACAC ATAC ATAC ATAC ACAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * * *
51269 ACAC ATAC ATAC ACAC ACAT ACAC ATAC ATAC ATAT ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
51317 ATAC ATAC ATAC --AC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * * * *
51363 --AC ACAC ATAC -CAC ACAC ATAC AAAC ATAC ACAC ATAC ACAC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
51408 ACAC ATAC ATAT ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
51456 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
51504 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
51552 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
51600 ATAC ATAC ATAC -TAC ATAC ATAC ATAC ATAC ACAT ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * * *
51647 ACAC ATAC ATAC ATAC ACAC ATAC ACAC ATAC ATAC ACAC ACAT ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
51695 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * *
51743 ATAC ATAC ATAC ACAC ATAC ATAC ATAC ACAC ATAC ATAC ATAC ACAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * *
51791 ACAC ACAC ATAC ATAT ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
51839 AT-- ATAC ATAC --AC ATAC ATAC ATAC ATAC ATAC ATAC ATAT ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
51883 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
51931 ATAC ATAC ATAT ATAT ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * *
51979 ATAC ATAC AAAC ATAC ATAC ATAC ATAC ATAC ATGC ATAC AAAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * *
52027 ATGC ATAC ATAC ATAC ACAC ATAC ATAC ATAC ACAC ATAC ACAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * *
52075 ATAC ACAC ACAC ATAC ACAT ATAC ATAC ATAT ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * *
52123 ATAC ATAC ATAC ATAC ATAC ACAC ATAC ATAC ACAC ATAC AAAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * *
52171 ACAC ATAC ATAC ATAC ACAC ACAC ACAC ATAC ATAT ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
52219 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
52267 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
52315 ATAC ATAC ATAC ATAC ATAC ATAC ATGC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * *
52363 ATAC ATAC ATAC ATAC ACAC ATAT ATAC ATAC ATAC ACAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * *
52411 ATAC ACAC ATAC ACAC ATAC ATAC --AC ACAC ATAC ACAT ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
52457 ATAC AT-- ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
52503 ATAC ATAC ATAC ATAC ATAC ATAC ACAC ATAC ACAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
52551 ATAC ATAC ATAC ATAC AT-- ATAT ATAC ATAC ATAC ATAT ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* *
52597 ATAC ATAC ATAT ATAT ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
52645 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
52693 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * *
52741 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAT ATAT ATAC ATGC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
52789 ATAC ATAC ATAC ATAC ATAC ATAC ACAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * * * *
52837 ACAC ATAC ATAC ACAC ATAC ACAC ATAC ATAC --AC ACAC ATAC ACAT
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
52883 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
52931 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ACAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
* * * *
52979 ACAC ATAC ATAC ATAC ATAC ATAT ATAC ATAC ATAC --AC ATAT ATAT
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
53025 ATAC ATAC ATAC ATAC --AC ATAC ATAC ATAC AGAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
53071 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ACAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
53119 ATAC ATAC ATAC ATAC ATAC ATAC ATAC AT-- ATAC AGAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
53165 -TAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
53212 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
53260 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
53308 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
*
53356 ATAC ATAC ATAC ATAC ATAT ATAC ATAC ATAC ATAC ATAC ATAC ATAC
1 ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC ATAC
53404 TATATTAATA
Statistics
Matches: 6378, Mismatches: 466, Indels: 166
0.91 0.07 0.02
Matches are distributed among these distances:
2 72 0.01
3 23 0.00
4 6278 0.98
5 2 0.00
6 3 0.00
ACGTcount: A:0.50, C:0.27, G:0.00, T:0.23
Consensus pattern (4 bp):
ATAC
Found at i:53476 original size:13 final size:13
Alignment explanation
Indices: 53444--53491 Score: 69
Period size: 13 Copynumber: 3.5 Consensus size: 13
53434 ATATACTTTT
53444 TATAGTTTATACATA
1 TATAGTTTAT--ATA
53459 TATAGTTTATATA
1 TATAGTTTATATA
*
53472 AATAGTTTATATA
1 TATAGTTTATATA
53485 TATAGTT
1 TATAGTT
53492 CACATAAACA
Statistics
Matches: 31, Mismatches: 2, Indels: 2
0.89 0.06 0.06
Matches are distributed among these distances:
13 21 0.68
15 10 0.32
ACGTcount: A:0.40, C:0.02, G:0.08, T:0.50
Consensus pattern (13 bp):
TATAGTTTATATA
Found at i:53524 original size:18 final size:18
Alignment explanation
Indices: 53501--53551 Score: 68
Period size: 18 Copynumber: 2.8 Consensus size: 18
53491 TCACATAAAC
53501 ATAATAAATATATAGCTT
1 ATAATAAATATATAGCTT
* *
53519 ATAATAATTATATAGTTT
1 ATAATAAATATATAGCTT
53537 ATAATATAA-ATATAG
1 ATAATA-AATATATAG
53552 TTTACAATTT
Statistics
Matches: 29, Mismatches: 3, Indels: 2
0.85 0.09 0.06
Matches are distributed among these distances:
18 28 0.97
19 1 0.03
ACGTcount: A:0.51, C:0.02, G:0.06, T:0.41
Consensus pattern (18 bp):
ATAATAAATATATAGCTT
Found at i:53574 original size:96 final size:97
Alignment explanation
Indices: 53464--53653 Score: 310
Period size: 98 Copynumber: 2.0 Consensus size: 97
53454 ACATATATAG
*
53464 TTTATATAAATAGTTTATATATATAGTTCACATAAACATAA-TAAATATATAGCTTATAATAATT
1 TTTATATAAATAGTTTATATATATAGTGCACATAAACATAATTAAATATATAGCTTATAATAATT
53528 ATATAGTTTATAATATAAATATAGTTTACAAT
66 ATATAGTTTATAATATAAATATAGTTTACAAT
* * ** *
53560 TTTATATACATAGTTTATATATATAGTGCACATAAATATAATTTTTATATATAGTTTATAATAAT
1 TTTATATAAATAGTTTATATATATAGTGCACATAAACATAA-TTAAATATATAGCTTATAATAAT
53625 TATATAGTTTATAATATAAATATAGTTTA
65 TATATAGTTTATAATATAAATATAGTTTA
53654 TATATAATTA
Statistics
Matches: 86, Mismatches: 6, Indels: 2
0.91 0.06 0.02
Matches are distributed among these distances:
96 38 0.44
98 48 0.56
ACGTcount: A:0.45, C:0.04, G:0.06, T:0.45
Consensus pattern (97 bp):
TTTATATAAATAGTTTATATATATAGTGCACATAAACATAATTAAATATATAGCTTATAATAATT
ATATAGTTTATAATATAAATATAGTTTACAAT
Found at i:53612 original size:2 final size:2
Alignment explanation
Indices: 53605--53687 Score: 54
Period size: 2 Copynumber: 43.5 Consensus size: 2
53595 ATATAATTTT
* * *
53605 TA TA TA TA GTT TA TA -A TA -A T- TA TA TA GTT TA TA -A TA TA AA
1 TA TA TA TA -TA TA TA TA TA TA TA TA TA TA -TA TA TA TA TA TA TA
*
53645 TA TA GTT TA TA TA TA -A T- TA TA TA T- TA TA TA TA TA TA TA TA
1 TA TA -TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
53685 TA T
1 TA T
53688 TATTTTTTTC
Statistics
Matches: 63, Mismatches: 8, Indels: 20
0.69 0.09 0.22
Matches are distributed among these distances:
1 7 0.11
2 53 0.84
3 3 0.05
ACGTcount: A:0.46, C:0.00, G:0.04, T:0.51
Consensus pattern (2 bp):
TA
Found at i:53630 original size:18 final size:18
Alignment explanation
Indices: 53607--53667 Score: 88
Period size: 18 Copynumber: 3.3 Consensus size: 18
53597 ATAATTTTTA
53607 TATATAGTTTATAATAAT
1 TATATAGTTTATAATAAT
53625 TATATAGTTTATAAT-AT
1 TATATAGTTTATAATAAT
*
53642 AAATATAGTTTATATATAAT
1 -TATATAGTTTATA-ATAAT
53662 TATATA
1 TATATA
53668 TTATATATAT
Statistics
Matches: 38, Mismatches: 2, Indels: 5
0.84 0.04 0.11
Matches are distributed among these distances:
17 2 0.05
18 27 0.71
19 7 0.18
20 2 0.05
ACGTcount: A:0.46, C:0.00, G:0.05, T:0.49
Consensus pattern (18 bp):
TATATAGTTTATAATAAT
Found at i:53675 original size:96 final size:96
Alignment explanation
Indices: 53467--53680 Score: 290
Period size: 96 Copynumber: 2.2 Consensus size: 96
53457 TATATAGTTT
* *
53467 ATATAAATAGTTTATATATATAGTTCACATAAACATAATAAATATATAGCTTATAATAATTATAT
1 ATATACATAGTTTATATATATAGTGCACATAAACATAATAAATATATAGCTTATAATAATTATAT
* *
53532 AGTTTATAATATAAATATAGTTTACAATTTT
66 AGTTTATAATATAAATATAGTTTACAATATA
* ** *
53563 ATATACATAGTTTATATATATAGTGCACATAAATATAATTTTTATATATAGTTTATAATAATTAT
1 ATATACATAGTTTATATATATAGTGCACATAAACATAA--TAAATATATAGCTTATAATAATTAT
*
53628 ATAGTTTATAATATAAATATAGTTTA-TATATA
64 ATAGTTTATAATATAAATATAGTTTACAATATA
*
53660 AT-TATATA-TTATATATATATA
1 ATATACATAGTT-TATATATATA
53681 TATATATTAT
Statistics
Matches: 105, Mismatches: 10, Indels: 6
0.87 0.08 0.05
Matches are distributed among these distances:
95 2 0.02
96 50 0.48
97 5 0.05
98 48 0.46
ACGTcount: A:0.46, C:0.04, G:0.05, T:0.45
Consensus pattern (96 bp):
ATATACATAGTTTATATATATAGTGCACATAAACATAATAAATATATAGCTTATAATAATTATAT
AGTTTATAATATAAATATAGTTTACAATATA
Found at i:53677 original size:98 final size:96
Alignment explanation
Indices: 53465--53684 Score: 289
Period size: 98 Copynumber: 2.2 Consensus size: 96
53455 CATATATAGT
* * *
53465 TTATATAAATAGTTTATATATATAGTTCACATAAACATAATAAATATATAGCTTATAATAATTAT
1 TTATATACATAGTATATATATATAGTGCACATAAACATAATAAATATATAGCTTATAATAATTAT
*
53530 ATAGTTTATAATATAAATATAGTTTACAATT
66 ATAGTTTATAATATAAATATAGTTTACAATA
* * ** *
53561 TTATATACATAGTTTATATATATAGTGCACATAAATATAATTTTTATATATAGTTTATAATAATT
1 TTATATACATAGTATATATATATAGTGCACATAAACATAA--TAAATATATAGCTTATAATAATT
*
53626 ATATAGTTTATAATATAAATATAGTTTATATATAA
64 ATATAGTTTATAATATAAATATAGTTTACA-AT-A
*
53661 TTATATATTATA-TATATATATATA
1 TTATATA-CATAGTATATATATATA
53685 TATTATTTTT
Statistics
Matches: 109, Mismatches: 10, Indels: 6
0.87 0.08 0.05
Matches are distributed among these distances:
96 37 0.34
98 49 0.45
99 2 0.02
100 18 0.17
101 3 0.03
ACGTcount: A:0.45, C:0.04, G:0.05, T:0.46
Consensus pattern (96 bp):
TTATATACATAGTATATATATATAGTGCACATAAACATAATAAATATATAGCTTATAATAATTAT
ATAGTTTATAATATAAATATAGTTTACAATA
Found at i:53683 original size:17 final size:17
Alignment explanation
Indices: 53633--53685 Score: 56
Period size: 17 Copynumber: 3.1 Consensus size: 17
53623 ATTATATAGT
*
53633 TTATA-ATATAAATATA
1 TTATATATATATATATA
53649 GTT-TATATATAATTATATA
1 -TTATATATAT-A-TATATA
53668 TTATATATATATATATA
1 TTATATATATATATATA
53685 T
1 T
53686 ATTATTTTTT
Statistics
Matches: 31, Mismatches: 1, Indels: 8
0.77 0.03 0.20
Matches are distributed among these distances:
16 2 0.06
17 13 0.42
18 4 0.13
19 12 0.39
ACGTcount: A:0.47, C:0.00, G:0.02, T:0.51
Consensus pattern (17 bp):
TTATATATATATATATA
Found at i:55068 original size:2 final size:2
Alignment explanation
Indices: 55061--55089 Score: 58
Period size: 2 Copynumber: 14.5 Consensus size: 2
55051 TCCTAAAATT
55061 TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
55090 TAGATTGTTT
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 27 1.00
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (2 bp):
TA
Found at i:55167 original size:26 final size:25
Alignment explanation
Indices: 55136--55218 Score: 93
Period size: 26 Copynumber: 3.4 Consensus size: 25
55126 TTACTATTTC
55136 AAATTTTATAAGTTCTCTTATTCTT
1 AAATTTTATAAGTTCTCTTATTCTT
* *
55161 AATATTTTATTAA-TT-T-ATATT-TC
1 AA-ATTTTA-TAAGTTCTCTTATTCTT
55184 AAATTTTATAAGTTCTCTTATTCTT
1 AAATTTTATAAGTTCTCTTATTCTT
55209 AAAATTTTAT
1 -AAATTTTAT
55219 TAATTTATTT
Statistics
Matches: 47, Mismatches: 4, Indels: 13
0.73 0.06 0.20
Matches are distributed among these distances:
21 3 0.06
22 8 0.17
23 4 0.09
24 8 0.17
25 4 0.09
26 17 0.36
27 3 0.06
ACGTcount: A:0.33, C:0.08, G:0.02, T:0.57
Consensus pattern (25 bp):
AAATTTTATAAGTTCTCTTATTCTT
Found at i:55178 original size:22 final size:21
Alignment explanation
Indices: 55153--55227 Score: 55
Period size: 22 Copynumber: 3.2 Consensus size: 21
55143 ATAAGTTCTC
55153 TTATTCTTAATATTTTATTAAT
1 TTATTCTTAA-ATTTTATTAAT
55175 TTATAT-TTCAAATTTTA-TAAGTTCT
1 TTAT-TCTT-AAATTTTATTAA----T
55200 CTTATTCTTAAAATTTTATTAAT
1 -TTATTCTT-AAATTTTATTAAT
55223 TTATT
1 TTATT
55228 TTTTTAGTAT
Statistics
Matches: 43, Mismatches: 1, Indels: 18
0.69 0.02 0.29
Matches are distributed among these distances:
21 3 0.07
22 17 0.40
23 4 0.09
25 2 0.05
26 14 0.33
27 3 0.07
ACGTcount: A:0.32, C:0.07, G:0.01, T:0.60
Consensus pattern (21 bp):
TTATTCTTAAATTTTATTAAT
Found at i:55186 original size:48 final size:48
Alignment explanation
Indices: 55125--55226 Score: 186
Period size: 48 Copynumber: 2.1 Consensus size: 48
55115 AAAATATATT
*
55125 TTTACTATTTCAAATTTTATAAGTTCTCTTATTCTTAATATTTTATTAA
1 TTTA-TATTTCAAATTTTATAAGTTCTCTTATTCTTAAAATTTTATTAA
55174 TTTATATTTCAAATTTTATAAGTTCTCTTATTCTTAAAATTTTATTAA
1 TTTATATTTCAAATTTTATAAGTTCTCTTATTCTTAAAATTTTATTAA
55222 TTTAT
1 TTTAT
55227 TTTTTTAGTA
Statistics
Matches: 52, Mismatches: 1, Indels: 1
0.96 0.02 0.02
Matches are distributed among these distances:
48 48 0.92
49 4 0.08
ACGTcount: A:0.31, C:0.09, G:0.02, T:0.58
Consensus pattern (48 bp):
TTTATATTTCAAATTTTATAAGTTCTCTTATTCTTAAAATTTTATTAA
Found at i:56310 original size:2 final size:2
Alignment explanation
Indices: 56303--56337 Score: 70
Period size: 2 Copynumber: 17.5 Consensus size: 2
56293 TACAAAATAC
56303 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
56338 CAAAAAGTTT
Statistics
Matches: 33, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 33 1.00
ACGTcount: A:0.51, C:0.00, G:0.00, T:0.49
Consensus pattern (2 bp):
AT
Found at i:59999 original size:9 final size:10
Alignment explanation
Indices: 59973--60002 Score: 51
Period size: 10 Copynumber: 2.9 Consensus size: 10
59963 CAAGTAGTTT
59973 TTTTTATTTGC
1 TTTTT-TTTGC
59984 TTTTTTTTGC
1 TTTTTTTTGC
59994 TTTTTTTTG
1 TTTTTTTTG
60003 TTGCAGATGG
Statistics
Matches: 19, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
10 14 0.74
11 5 0.26
ACGTcount: A:0.03, C:0.07, G:0.10, T:0.80
Consensus pattern (10 bp):
TTTTTTTTGC
Found at i:60663 original size:35 final size:35
Alignment explanation
Indices: 60624--60696 Score: 128
Period size: 35 Copynumber: 2.1 Consensus size: 35
60614 GAAAGCCAAG
* *
60624 GCACACAGTGAGGATCATCAGAAAATGGCGATGAA
1 GCACACAGTGAGAATCATCAGAAAATGGAGATGAA
60659 GCACACAGTGAGAATCATCAGAAAATGGAGATGAA
1 GCACACAGTGAGAATCATCAGAAAATGGAGATGAA
60694 GCA
1 GCA
60697 GCTTCTCTCT
Statistics
Matches: 36, Mismatches: 2, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
35 36 1.00
ACGTcount: A:0.42, C:0.16, G:0.27, T:0.14
Consensus pattern (35 bp):
GCACACAGTGAGAATCATCAGAAAATGGAGATGAA
Found at i:66360 original size:43 final size:43
Alignment explanation
Indices: 66299--66397 Score: 180
Period size: 43 Copynumber: 2.3 Consensus size: 43
66289 TCTAGGAGAA
* *
66299 GATTATGAGTTAGTAATCACCTTACCTTCATATATAAAAAAAG
1 GATTACGAGTTAGAAATCACCTTACCTTCATATATAAAAAAAG
66342 GATTACGAGTTAGAAATCACCTTACCTTCATATATAAAAAAAG
1 GATTACGAGTTAGAAATCACCTTACCTTCATATATAAAAAAAG
66385 GATTACGAGTTAG
1 GATTACGAGTTAG
66398 TAGGTAGGCA
Statistics
Matches: 54, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
43 54 1.00
ACGTcount: A:0.41, C:0.14, G:0.14, T:0.30
Consensus pattern (43 bp):
GATTACGAGTTAGAAATCACCTTACCTTCATATATAAAAAAAG
Done.