Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001100.1 Hibiscus syriacus cultivar Beakdansim tig00002181_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30417

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6224--6279
16
3.7
16
79
9
64
58
1
0
39
1.08
8317--8351
2
18.0
2
88
5
54
48
0
0
51
1.00
13744--13843
3
34.7
3
80
11
120
34
2
0
64
1.05
13744--13852
28
3.8
29
85
11
143
35
1
0
62
1.06
13744--13844
46
2.3
45
81
11
111
34
1
0
63
1.06
26415--26458
1
44.0
1
90
0
70
95
0
4
0
0.27
26415--26472
18
3.1
18
92
7
89
89
0
10
0
0.48
26415--26476
21
2.9
21
81
11
72
88
0
11
0
0.51
26412--26468
16
3.4
16
86
13
80
89
0
10
0
0.49
26416--26476
29
2.0
29
81
18
70
88
0
11
0
0.51
27605--27842
52
4.7
52
93
6
420
22
15
24
37
1.93
27605--27842
99
2.4
102
94
5
416
22
15
24
37
1.93
28469--29186
110
6.7
110
89
8
1072
37
13
19
29
1.90
28469--29190
218
3.3
219
91
6
1117
37
13
19
29
1.90
29475--29577
3
34.7
3
86
5
147
33
1
0
65
1.04

Tables:   1

The End!