Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001103.1 Hibiscus syriacus cultivar Beakdansim tig00002184_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58976

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11033--11063
16
1.9
16
93
0
53
32
19
22
25
1.97
15276--15318
16
2.7
16
81
0
59
23
18
20
37
1.94
15320--15353
17
2.0
17
94
0
59
38
11
11
38
1.79
17912--18268
131
2.7
130
81
4
450
32
10
16
39
1.84
19532--19558
6
4.5
6
100
0
54
18
14
14
51
1.76
25029--25481
135
3.4
133
82
1
521
32
20
15
31
1.94
25672--25729
3
20.3
3
82
10
68
34
3
0
62
1.12
25672--25729
23
2.6
23
89
8
84
34
3
0
62
1.12
27200--27238
17
2.4
17
87
8
55
35
7
5
51
1.53
28430--28474
20
2.2
20
84
0
54
37
13
0
48
1.42
40453--40503
21
2.4
21
96
0
93
27
11
33
27
1.92
40803--40827
10
2.5
10
100
0
50
20
8
20
52
1.71
41582--41622
21
2.0
21
86
9
59
29
2
17
51
1.58
43802--43840
21
1.9
20
84
5
51
38
17
15
28
1.91
55602--55636
13
2.7
13
86
0
52
11
25
0
62
1.28

Tables:   1

The End!