Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001112.1 Hibiscus syriacus cultivar Beakdansim tig00002194_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68921

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5723--5764
14
2.8
15
82
7
50
66
2
16
14
1.35
8386--8413
13
2.2
13
100
0
56
39
32
0
28
1.57
9324--9383
31
1.9
31
89
0
93
40
15
18
26
1.90
19845--19903
11
4.8
12
77
18
50
76
1
1
20
0.96
19849--19905
28
2.0
28
83
6
71
73
1
1
22
1.02
23925--24148
43
5.2
42
84
5
279
19
25
23
31
1.98
23925--24187
43
6.1
43
81
6
262
20
25
22
31
1.98
23931--24187
131
2.0
131
83
6
333
19
25
22
31
1.98
27102--27147
24
1.9
24
100
0
92
30
4
17
47
1.67
29065--29294
43
5.3
43
86
3
300
19
24
22
34
1.96
29083--29334
130
1.9
131
83
3
328
19
22
22
36
1.95
31112--31445
169
2.0
169
86
1
463
30
13
19
36
1.90
33730--33760
16
1.9
16
93
0
53
41
19
19
19
1.90
36285--36329
23
2.0
23
83
12
58
60
6
0
33
1.23
49157--49216
31
1.9
31
96
0
111
41
13
16
28
1.86
52687--52717
2
15.5
2
93
0
53
48
48
3
0
1.17
54447--54489
21
2.1
20
83
12
52
44
18
9
27
1.80
54768--54847
31
2.6
31
85
0
115
42
21
16
20
1.89
65177--65235
21
2.8
20
87
10
82
47
27
5
20
1.71

Tables:   1

The End!