Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001124.1 Hibiscus syriacus cultivar Beakdansim tig00002224_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82546

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5102--5185
19
4.2
19
74
14
78
17
22
17
41
1.90
5108--5191
43
2.0
43
100
0
168
20
25
16
38
1.93
9681--9707
3
9.0
3
100
0
54
66
0
33
0
0.92
17268--17312
22
2.0
22
91
0
72
24
33
8
33
1.86
23060--23142
41
2.0
41
100
0
166
28
7
31
32
1.84
31993--32176
74
2.5
74
85
1
244
48
10
11
29
1.73
36236--36350
50
2.3
51
81
1
133
20
30
24
24
1.99
37341--37427
35
2.5
34
80
12
97
55
10
8
26
1.61
37639--37686
9
5.3
9
79
0
51
10
35
22
31
1.88
38021--38074
18
3.1
17
82
10
72
27
20
22
29
1.98
39583--39804
111
2.0
111
96
0
408
45
11
8
35
1.70
43656--43684
8
3.6
8
100
0
58
31
13
41
13
1.84
52457--52486
13
2.3
13
100
0
60
60
20
13
6
1.55
54901--54935
2
17.5
2
100
0
70
48
0
0
51
1.00
56019--56044
13
2.0
13
100
0
52
23
38
23
15
1.92
62369--62397
2
14.5
2
100
0
58
48
0
0
51
1.00
67324--67357
18
1.9
17
94
5
59
44
0
0
55
0.99
68766--68821
23
2.4
23
96
0
103
26
8
19
44
1.80
70682--70754
28
2.6
29
74
10
71
28
1
1
68
1.06
71784--71813
15
2.0
15
93
0
51
20
3
0
76
0.92
73849--73928
34
2.2
36
93
6
137
32
5
0
62
1.17

Tables:   1

The End!