Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001136.1 Hibiscus syriacus cultivar Beakdansim tig00002264_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41091

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4365--4427
22
2.9
21
85
4
81
20
36
23
19
1.95
4367--4448
22
3.8
20
73
10
56
21
37
23
17
1.93
4366--4449
44
1.9
44
80
9
100
22
36
22
17
1.94
8465--8541
22
3.5
22
96
0
145
40
14
11
33
1.82
13455--13558
7
16.5
6
73
22
65
0
19
0
79
0.78
13453--13554
19
5.6
17
81
14
107
0
19
0
79
0.79
13464--13558
4
24.8
4
80
15
103
0
20
0
80
0.72
13449--13538
23
3.8
24
84
7
87
1
18
0
80
0.78
13464--13558
23
4.1
22
89
8
129
0
20
0
80
0.72
17273--17326
14
3.8
14
85
2
63
51
9
14
24
1.71
18787--18845
18
3.4
17
74
21
52
64
1
3
30
1.20
19657--19706
3
17.3
3
76
15
52
66
2
2
30
1.14
20999--21062
3
23.0
3
81
15
75
65
1
0
32
1.02
21001--21058
19
3.1
19
85
9
66
65
1
0
32
1.03
39081--39178
42
2.4
41
77
1
106
30
24
23
21
1.99
38917--40149
214
5.8
214
92
1
2023
31
19
15
33
1.93
40153--40358
34
5.9
34
84
2
241
21
20
21
35
1.96

Tables:   1

The End!