Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001137.1 Hibiscus syriacus cultivar Beakdansim tig00002265_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69055

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6265--6294
2
15.0
2
92
0
51
46
0
0
53
1.00
6513--6556
22
2.1
21
84
16
56
56
0
4
38
1.20
7979--8021
3
14.7
3
83
13
54
69
0
2
27
1.00
9421--9484
29
2.2
29
78
10
69
40
14
12
32
1.83
9506--9569
25
2.6
25
94
0
110
46
10
10
31
1.74
21232--21313
31
2.7
31
90
1
121
20
8
12
58
1.60
21730--21777
21
2.3
21
96
0
87
31
33
18
16
1.94
22696--22832
42
3.3
42
95
0
247
35
25
18
19
1.95
22696--22879
21
8.8
21
68
17
116
34
26
19
20
1.96
22696--22875
42
4.3
40
86
8
204
33
26
18
21
1.96
25892--26208
138
2.3
137
82
2
384
29
11
16
42
1.84
28556--28626
19
3.5
19
77
17
63
56
2
2
38
1.29
29346--29395
15
3.2
16
80
11
59
48
0
0
52
1.00
44401--44588
32
5.8
32
91
1
288
27
17
20
34
1.95
49965--50006
20
2.2
20
87
8
61
57
21
0
21
1.41
50480--50615
62
2.2
63
94
1
238
32
22
10
35
1.88
57547--57592
3
15.7
3
90
4
58
32
6
0
60
1.22
57553--57596
21
2.1
21
91
0
70
31
9
0
59
1.29
60129--60311
54
3.4
53
84
3
213
39
8
5
45
1.58
64920--64988
33
2.1
34
91
2
113
31
14
0
53
1.41
68433--68681
118
2.1
118
86
8
346
37
25
5
31
1.78

Tables:   1

The End!