Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001155.1 Hibiscus syriacus cultivar Beakdansim tig00002302_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33662

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1451--1671
117
1.9
117
81
5
268
29
13
7
48
1.70
2975--3018
19
2.3
19
100
0
88
25
22
31
20
1.98
3421--3488
27
2.6
27
93
4
113
30
10
16
42
1.81
7185--7252
27
2.6
27
93
4
113
29
11
17
41
1.85
16828--16891
2
32.0
2
100
0
128
50
0
0
50
1.00
17878--17919
19
2.2
20
86
4
59
54
0
0
45
0.99
18347--18384
16
2.2
18
86
9
53
65
2
2
28
1.19
19215--19335
42
3.0
39
73
11
120
47
0
0
51
1.12
19297--19358
22
2.8
20
81
13
61
54
1
0
43
1.09
19302--19355
21
2.5
21
80
16
58
55
1
0
42
1.10
19634--19673
2
20.0
2
100
0
80
50
0
0
50
1.00
32501--32528
3
9.3
3
100
0
56
32
0
0
67
0.91
32527--32616
3
30.3
3
95
2
164
0
1
33
65
1.00

Tables:   1

The End!