Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000116.1 Hibiscus syriacus cultivar Beakdansim tig00000211_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74943

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--322
162
2.0
162
91
3
524
29
26
14
28
1.95
1--327
55
6.1
55
87
3
488
29
26
14
29
1.95
13--387
162
2.3
162
86
4
481
29
26
14
29
1.95
18--390
107
3.5
108
84
7
384
29
26
14
29
1.95
5145--5192
21
2.2
22
89
10
73
16
16
18
47
1.82
7271--7308
2
19.0
2
100
0
76
50
0
0
50
1.00
9313--9350
3
12.7
3
89
10
60
63
0
0
36
0.95
14963--15019
30
1.9
30
85
0
78
43
3
0
52
1.18
16489--16515
2
13.5
2
100
0
54
48
0
0
51
1.00
23199--23240
16
2.9
14
77
16
50
83
0
14
2
0.75
23206--23240
16
2.2
15
90
10
52
85
0
11
2
0.69
24511--24888
125
3.0
125
82
3
449
32
17
26
22
1.97
26042--26141
36
2.8
36
81
1
121
41
23
16
20
1.90
26555--27152
54
11.2
54
90
2
877
31
20
26
21
1.98
26555--27285
108
6.8
108
86
5
892
31
19
25
23
1.98
26557--27373
108
7.6
111
82
9
397
31
19
25
23
1.98
27091--27384
56
5.3
54
78
13
244
30
17
23
27
1.97
33214--33249
3
11.7
3
94
5
63
63
0
0
36
0.94
34412--34829
80
5.1
82
75
8
352
32
22
20
24
1.98
36585--36666
20
3.8
21
71
17
69
31
2
1
64
1.14
36607--36687
3
26.7
3
72
22
55
32
2
2
62
1.21
36604--36672
21
3.5
18
76
19
75
33
1
1
63
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36607--36687
26
3.2
25
80
16
87
32
2
2
62
1.21
36554--36671
21
5.5
21
70
21
68
28
3
0
66
1.13
36585--36672
44
2.2
43
84
13
116
31
2
1
64
1.13
37099--37174
11
7.1
10
71
16
55
13
5
2
78
1.02
37081--37114
18
1.9
18
88
5
52
11
5
2
79
1.02
37078--37143
29
2.2
30
84
7
82
15
6
1
77
1.04
37131--37173
20
2.2
19
87
8
59
9
6
4
79
1.06
37097--37244
22
6.7
21
73
18
83
14
8
2
75
1.15
37822--37880
31
1.9
31
96
0
109
40
15
11
32
1.83
40572--44129
157
22.9
157
86
3
4907
38
17
13
30
1.88
40572--44129
622
5.7
622
90
1
5517
38
17
13
30
1.88
52062--52099
15
2.4
16
83
16
53
26
7
5
60
1.46
57441--57505
32
2.0
33
93
3
114
32
13
9
44
1.76
63449--63499
22
2.5
19
77
17
57
23
1
13
60
1.43
63455--63499
22
2.0
22
95
0
81
22
2
13
62
1.42
64463--64536
30
2.4
32
88
4
107
39
12
8
40
1.72
64854--64903
2
25.0
2
100
0
100
50
0
0
50
1.00
67384--67449
34
1.9
34
82
11
82
50
7
0
42
1.31
67483--67517
18
1.9
18
94
0
61
45
0
11
42
1.40
67489--67530
2
21.0
2
80
9
50
47
0
7
45
1.30
68329--68376
24
2.0
24
96
4
89
39
43
8
8
1.65

Tables:   1

The End!