Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001160.1 Hibiscus syriacus cultivar Beakdansim tig00002315_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77460

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2934--2982
26
2.0
24
88
11
73
32
8
0
59
1.27
14202--14256
24
2.3
24
100
0
110
56
3
5
34
1.40
16748--17191
223
2.0
225
95
3
797
35
14
10
40
1.80
21012--21052
21
2.0
21
100
0
82
24
24
24
26
2.00
21655--21709
18
3.1
18
100
0
110
27
32
21
18
1.96
22770--23082
158
2.0
158
97
0
590
37
14
12
34
1.85
26266--26297
16
2.0
16
93
0
55
46
31
0
21
1.52
27392--27470
10
8.3
9
78
9
77
16
29
27
26
1.97
27387--27470
29
2.9
29
84
8
109
16
28
26
28
1.97
27391--27468
19
4.1
19
79
14
88
17
26
28
26
1.98
27467--27495
5
5.8
5
100
0
58
20
58
20
0
1.39
27492--27522
7
4.4
7
100
0
62
16
29
29
25
1.96
34765--34824
17
3.3
17
82
17
84
18
45
23
13
1.84
34771--34812
12
3.8
12
75
18
54
19
45
23
11
1.83
36732--36773
18
2.3
19
84
12
52
47
4
9
38
1.57
39942--39987
22
2.0
23
91
4
76
28
17
19
34
1.94
56334--56480
48
3.1
45
85
8
195
27
13
19
39
1.89
60159--60235
36
2.1
36
92
0
127
45
19
24
10
1.81
64815--65118
51
5.9
51
93
3
509
28
14
29
26
1.95
64823--65286
106
4.4
106
87
4
528
28
16
27
28
1.97
64810--65286
51
9.0
51
88
5
492
27
16
27
28
1.97

Tables:   1

The End!