Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001161.1 Hibiscus syriacus cultivar Beakdansim tig00002316_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53588

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8918--9008
28
3.2
28
75
15
80
38
10
10
39
1.76
10824--10892
23
3.0
23
84
0
93
26
26
26
21
2.00
10908--11122
103
2.1
103
97
0
403
36
24
13
25
1.93
13823--13875
18
2.9
18
85
0
70
28
33
20
16
1.95
14087--14120
18
2.0
17
88
11
52
23
17
5
52
1.66
18057--18090
18
2.0
17
88
11
52
23
17
5
52
1.66
24949--24998
25
2.0
25
92
0
82
50
12
14
24
1.76
27580--27763
75
2.5
75
86
1
253
27
6
17
48
1.71
29810--29845
13
2.8
13
91
0
54
25
47
22
5
1.73
30607--30646
8
4.7
9
85
14
50
47
0
0
52
1.00
30614--30644
2
15.5
2
100
0
62
48
0
0
51
1.00
40910--40967
11
5.0
11
83
10
55
55
0
0
44
0.99
40927--40980
2
29.0
2
85
14
80
51
0
0
48
1.00
42925--43011
38
2.3
38
84
4
113
39
5
9
45
1.60
42941--43023
38
2.2
38
82
4
96
40
6
6
46
1.53
50170--50195
3
8.7
3
100
0
52
65
0
0
34
0.93
50302--50360
30
2.0
30
83
6
75
49
1
1
47
1.21

Tables:   1

The End!