Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001176.1 Hibiscus syriacus cultivar Beakdansim tig00002342_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73013

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8826--8902
32
2.4
32
91
0
118
41
11
27
19
1.86
10632--10703
11
6.6
11
68
13
51
45
0
2
51
1.15
10660--10700
21
2.0
20
85
4
55
43
0
2
53
1.13
10643--10712
32
2.2
31
82
7
88
48
1
4
45
1.30
10657--10720
32
2.0
32
84
0
83
48
1
3
46
1.27
16763--16804
11
3.8
11
83
0
57
33
23
11
30
1.91
17323--17373
22
2.3
22
86
3
75
29
19
25
25
1.99
20491--20689
106
1.9
107
84
5
269
30
15
21
32
1.94
21042--21110
35
2.0
35
88
0
102
10
28
20
40
1.85
31491--31574
23
3.7
23
90
0
123
23
25
28
22
1.99
37229--37336
36
2.9
36
91
2
171
31
12
4
51
1.59
37587--37621
10
3.5
10
92
0
61
14
8
17
60
1.58
37805--37933
10
11.5
10
69
16
51
12
10
17
59
1.60
37801--37838
20
1.9
20
94
0
67
21
13
7
57
1.60
37825--37933
24
4.7
23
78
8
121
11
10
18
60
1.57
37843--37909
33
2.0
34
88
8
102
7
10
22
59
1.55
37820--37933
47
2.4
47
79
0
129
12
10
17
59
1.60
52695--53065
109
3.6
97
79
13
284
19
19
26
34
1.96
52593--52951
200
1.8
198
89
4
571
19
21
26
33
1.97
52789--53097
109
2.9
108
87
6
389
20
19
26
33
1.96
62417--62460
22
1.9
23
82
17
56
15
20
15
47
1.82
63066--63095
4
7.2
4
96
3
51
70
0
3
26
1.03
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66891--66927
11
3.4
11
92
0
65
16
2
27
54
1.56
70089--73013
4
741.2
4
96
3
5434
49
25
0
24
1.51

Tables:   1

The End!